Rhopalosiphum maidis (corn leaf aphid): 113558493
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Entry
113558493 CDS
T06065
Name
(RefSeq) zinc finger protein ush isoform X1
KO
K17441
zinc finger protein ZFPM1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113558493
Transcription factors [BR:
rmd03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
113558493
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_7th_ZNF462
Zn_SUZ12
zf-C2H2_16
zf-C2H2_REST
zf-C2HE
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
113558493
NCBI-ProteinID:
XP_026819762
LinkDB
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Position
3:68641507..68742093
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AA seq
1081 aa
AA seq
DB search
MSRRKQSNPKPLKPGEDSEWTTNDEVVGGSDATAKCEVKTEQQQPSPSSRPEPEDPPPAN
DVQPTLRLNTNLATDPARWSLADKPSPPQPPLPPPPPPSVTVTAAAAASSSESSSSSSSS
SSLSSSAIGEPTHNVVTITAPRAIQIFICNPCGIRFSSLSTLDAHQTYYCSRRHKKDSES
DDVKLPIVIEPDEMTLGNDTDSRPSSVEPNSKSMRTGKQYKCPHCSYSADKKVSLNRHMR
MHSISPVLVQSPPCPSDNADPSVVDRYCQNCDIRFSNLRTYQAHKTHYCNTRHVVKPTPS
SSPMPNNPSPTGVVPTYLALPTNPVIVVPYTLVQNASVLSALSAEIGPSPPTDTACIVLS
DGTLQPIAQALVPTKFNMIANSENIQRDHSQSPPEEYFSPPKKAESVSPETKMRPAAQPS
SPLDLRLKRVAKSSQDAAGCTDGEEEKENRRSDGNITDAEDIVCAPSIPCMILSPSSSPT
SGGGGDGGGNKTPQHRPGAYHHHNQQLQQHHHQQQQQQQQQQQQQQQQQLQQQHHHRNHN
PLPLQPPTNGMVQHCGKPVPVTAVYDGTDRNGGKFSVSSLLYASSGRLQDGVKQEPVNNG
EPPHLAMHQMPAAHHRFSAMHKSLLSSAVAAPMPPGVQPRGLGELLSAAPVLPYFTPDMT
LRLTSNSTQDGGGMPPAHHQFYLKQGPSKCESCNIVFCKYENFLAHKKHYCASRPPPDGG
DGDADKTSPEGSPGPKPLTVSSPQSSKDSVSPTPVLKPPMIQFICSTCGVKFSSFDNLTT
HQTFYCPNRTAVALQEPVDNKATLLAPPLKCPKCKMTIDGTHHHQCQPVNCWKCPVCGAV
CSSASAAQKHLDNHNGIRAFVCTICQYKGNTLRGLRTHIRMHFNKRMIPDLMEEDYVTCL
IDENSASSMVDGRAKTPTTSESADKPSVPSTVLVKTTTATSSLSSSSPSPSSSLSSSTAA
AAIVVVDDEPKELVVVKQESVNGVAAPSADESATAGGYRQQREQPATAPDDPVQQQLAAP
QPQLQLQNAGNRRPGITAKYCKACDISFNYLSTFIAHKKYYCRNSTEYKCNTENAKAATV
T
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaggaaacagagcaacccgaagccgctaaaacctggcgaagatagcgaatgg
accacaaatgatgaagtggttggcggtagcgatgcgacagcaaaatgtgaggtaaagaca
gaacagcaacaaccgtcgccgtcatcgcgacctgaaccggaagacccaccacccgccaat
gacgtgcaaccaacgttaagacttaatacgaatttagccactgatccagccagatggtcg
cttgcagacaagccgtcaccgccacagcctccactgccaccaccgccaccaccatcagtg
acagtaacggcggctgcagccgcgtcatcttcggaatcgtcgtcttcgtcgtcttcgtcg
tcttcactgtcatcgtcggcgatcggtgagcctactcacaacgtagtcactattaccgca
cctagagcaattcaaatattcatttgcaacccgtgcgggatacgattcagttcgctgagc
acgctggacgcccatcaaacgtactattgttcacgcagacacaaaaaagattcagaatcg
gacgatgtgaagttgccgattgttatcgagccggacgagatgaccctaggcaacgacaca
gatagccgtccgtcgtccgtcgaaccgaactcaaaatcgatgagaacgggaaaacagtac
aagtgccctcactgttcatatagcgccgataaaaaagtgagtctaaacagacacatgcgc
atgcattccatatcaccggtgttggtgcaatcgccgccgtgtccgtcggacaatgctgac
ccgtcggtggtggaccgatactgccagaactgtgacatcaggttctctaacctgcgtacg
taccaggcgcataagacgcactactgtaacacgcggcacgtggtcaaaccaaccccgtcc
agctcgcctatgcctaacaacccgtcgcccactggcgtggtgcccacttacctggcactg
cccaccaatccggtcatcgtagttccttacacactcgtacaaaatgcaagcgtcctgtcc
gcactatcggcagagataggcccgtccccgcctaccgacaccgcttgcatcgtcctgtcc
gacggcacacttcagcccattgcccaggcactggtgcccaccaaattcaatatgatcgcc
aacagcgaaaatatacagagagaccactcgcagtctccaccggaagaatatttttcgcca
cccaaaaaagcagagtccgtcagcccggagacgaaaatgagaccggcagcgcaaccgtcg
tcgccgctcgacttgcgactgaagcgcgtggcaaagtcctcgcaggacgccgctggctgc
acggacggcgaagaggaaaaggagaacagacggagcgacggtaacataacggacgccgag
gacatagtgtgcgcgccgtccattccgtgcatgatactgtcgccgtcgtcttctccgacg
tccggtggcggcggcgacggtggtggtaacaagacgccacaacaccggcccggagcgtac
caccaccacaatcagcaactgcagcagcaccaccaccagcaacaacaacaacagcaacaa
caacaacaacaacagcaacagcaacagctgcaacaacagcaccaccatcgcaaccacaac
ccgctgccgctgcaaccaccgactaacggcatggtgcagcattgcggcaagcccgttccc
gtaacggccgtgtacgacggcaccgaccgaaacggtggaaagttcagcgtgtctagcctg
ttgtacgcgtcgagtggccggctgcaggatggcgtcaaacaggaaccggtcaacaacggt
gagccaccgcatctcgcgatgcaccaaatgccggctgcgcatcacaggttcagcgcgatg
cacaaatcgctattgtcctcggccgttgcggccccaatgccacccggcgttcagccgcgt
ggtctcggtgaactcctcagcgcggcccccgtgttgccgtacttcacacccgacatgacg
ctccgactaacttcgaattcgacacaggacggcggcggcatgccgcccgcgcaccatcag
ttctacttgaaacagggcccgtccaagtgcgagagctgcaacatcgtgttctgcaagtac
gagaatttcctggcgcacaagaaacactactgcgcgtcccgcccaccaccggatggcggg
gacggcgacgcggacaagacgagccccgaaggatcgcccgggccaaagccgctgacggtg
tcgtcaccgcagtcgtccaaggacagcgtaagccccacgccggtgctcaagccacccatg
atccagttcatatgctccacgtgcggcgtcaaattctcatcgttcgataacctcaccacg
catcagactttctactgcccgaacaggactgccgtggcgctgcaggaaccggttgacaat
aaggcgactctgcttgcaccgccgttaaaatgtccaaagtgcaaaatgaccattgacggg
acacaccatcaccagtgtcagccagttaactgttggaagtgtccagtgtgcggcgccgtg
tgctcgagtgcatcggccgcccaaaaacatttggacaaccataacggtataagggcgttc
gtgtgcactatctgccagtacaagggcaacacgcttaggggtctcagaacgcatattcgt
atgcactttaacaagcgtatgattccggatctcatggaagaagattacgtgacgtgtctg
atcgacgagaactctgcgtcatcgatggttgacggacgtgccaaaacgccgacgacttca
gagtccgcggacaagccgtcagtgccgtcgaccgtccttgttaagactaccaccgccacc
tcgtctttgtcttcgtcgtcgccgtcgccttcgtcgtctctgtcgtcgtccactgccgcg
gccgccatcgtcgtcgtggacgacgagccaaaagagctggtcgtcgtcaagcaggaatcg
gtcaacggcgtggccgcgccgtcggcggacgagtcggccaccgcaggcggttaccgtcaa
cagcgcgaacagccggccaccgcgcccgacgacccggtacagcaacaactcgcggcgccg
cagccgcaactccaactgcaaaacgccggcaacaggcggcccggcatcaccgcgaaatac
tgcaaggcgtgcgacatatcgttcaactatctgtccacgttcatcgcgcacaaaaagtac
tactgccggaacagcaccgagtacaagtgcaacacggaaaacgccaaggcggccaccgtc
acttag
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