KEGG   Rhopalosiphum maidis (corn leaf aphid): 113558566
Entry
113558566         CDS       T06065                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rmd03041]
    113558566
Spliceosome [BR:rmd03041]
 Complex B
  Other components
   Complex B specific factors
    113558566
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML LisH_TPL NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_SCAP Beta-prop_WDR35_TULP_N VPS8_N PQQ_2 zf_topless LisH_WDR26
Other DBs
NCBI-GeneID: 113558566
NCBI-ProteinID: XP_026819863
LinkDB
Position
1:complement(22518701..22522538)
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLMKSLQTLQEETSVSLNTVDSIDGFVADIHNGHWDTVL
KAVQSLKLPDSKLIDLYEQVVFELIELRELGAARSLLRQTDPMIALKQHEPDRYIHLENL
LARSYFDPREAYPEGTSKEKRRIAIAQSLAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTSIDLFRGKAAVRDLEEETFPTQLFKQIKFIQKSHVECSRFSPDGQFLVTATVDGFIEV
YNFVTGKIRKDLKYQAQDNFMLMEDAVLSLNFSRDSEMLVSGSQGGKVTVWKIMTGQVMR
KFEKAHVLGITCVQFSRDNTQILTGSFDMTIRIHGLKSGKTLKEFRGHTSFVNEVVYTVD
GHSVISASSDSTVKVWSVKTTECTHTFKSMGAADVAVNNVHLFPKNQDHFVVCNRSNTIV
IMNMQGQIVRSFTSGKREGCNFVCSTVSPRGDWIYAVAEDYNLYCFSLNSGKLEKTLQIH
EKDVIGLTHHPHQNLLCTYCEDGMVRLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtctattgaaatcgagtctgctgatgtcatcagacttatacagcaatatttaaaggaa
tcaaatctaatgaaatctttgcaaactcttcaagaagaaaccagtgtatcgttaaacaca
gtagatagtatcgatggttttgtcgcagatatacacaacggtcattgggatacagtgtta
aaagcagtacagtctttgaaattacctgatagtaaattaatcgatttgtatgaacaagtt
gtatttgaactaatagagttacgtgaacttggagctgctcgatcactattgcgtcaaact
gatcctatgattgctttaaaacaacatgaacctgatcgttatatacaccttgaaaatctt
ctagctcggtcttattttgatcctcgtgaagcatatcctgaaggcacatctaaagaaaaa
cgtaggattgctattgctcaatcattagctggtgaagtatctgtagtaccatcatcaaga
ctcttagcactattaggtcaagcattaaagtggcaacaacatcagggtcttctacctcca
ggtacttcaattgatttatttagaggtaaagcagcagttcgtgatcttgaggaagaaaca
ttccctactcaactatttaaacaaattaaatttatccaaaagagccacgttgaatgttct
agattttccccagatggccagtttttggtgactgccacagttgatggatttattgaagta
tacaattttgttacaggaaaaattagaaaagatcttaaatatcaagctcaagataatttt
atgcttatggaagatgctgtactaagtttaaatttttctcgtgatagtgaaatgctggtg
tctggctctcagggtggaaaggtgactgtttggaaaataatgacaggacaagtaatgcga
aaatttgaaaaagctcatgtactaggaattacttgtgtacaattttctcgagataataca
caaattttaactggttcatttgatatgactataagaattcatggcttgaagtcaggtaaa
acgcttaaagaatttagaggacacacgtcatttgttaatgaagtcgtttatactgttgat
ggtcatagtgtaataagtgcgtctagtgatagtactgtaaaagtatggagtgtaaaaaca
acagaatgtacacacacctttaaatccatgggagcagccgatgtagctgtcaataatgta
catcttttccctaaaaatcaagatcattttgttgtttgtaaccgttcaaatactattgta
attatgaacatgcaaggccaaatcgttagatcatttacaagtggtaaacgtgaaggttgc
aattttgtatgttccacggtatcacctaggggagattggatatatgcagttgctgaagat
tataacttgtactgtttttctttaaacagtgggaaattggaaaaaaccttacaaatacac
gaaaaagacgtcattggactaacacatcatcctcatcaaaatttattatgtacctactgt
gaggatggtatggtacgattatggaaaccttaa

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