Rhopalosiphum maidis (corn leaf aphid): 113558597
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Entry
113558597 CDS
T06065
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
113558597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rmd04040
]
113558597
Ion channels [BR:
rmd04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113558597
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GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank
Ank_2
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
113558597
NCBI-ProteinID:
XP_026819893
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All DBs
Position
3:18402957..18407630
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AA seq
649 aa
AA seq
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MLDRLLEFDETNNGTGNRGKGIGWNRVRSDDGVNAADPEDDDDSEEFPRFMTPLMLAAQC
GLYETVEYLVNRGHKLDRPHPPRCTCSDRCMVSASRADAVADSCKRLNGYWAISNPTFIC
TTSSSSDPVLECFRLHEELLRCGSAEQVHNATYTYMAAQVRQFAVEMIVNCRTSDEVKIM
LRNRDGCKFRGQFPYPRLITAMDYKQKEFVAHINIQQVLETAWLGDWIEWKAYSGPRKLA
YLLWRFCMLPVTVALGMLAPNSKLNQFNRLPINRMFNSLVTYLVFLGLLFAHSNADKFKT
HRGAPELRTWLPIVVFVLGHVVEKTKLRLQQGPGRFFKNLWNVFDTVKLTLFVVAFLCWA
VAGVRAGRESDHHLDRKYWHWADPQLLAEGLFTVATVMAYLRLLFLCQLNYYVGPMQVSL
GKVLHDFGKFATFLVIIMAAFTCGLGTYYSYYAGMVYRDPETGETTRQEDSFVTVADTFK
TLFWGIFCMTSLDAPNVVVGNAAPATGRVDAEAQTHQFTQLVGYGLFAVFEVLMVVVMMN
MLIAAMSDTFQGVTDNAEYEWLFGRTKVYVSYMLQDDLPPPFNLLPTTGLLFCAKRYVSK
SSRGYGLLPGDDGRGDFDSRSTAAAPEFRDLMAEIVKRYFTMHRAPAEH
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttggaccggctgctggaattcgacgagaccaacaacggaacgggaaaccggggcaag
ggcattggctggaatcgggtgcggtcggacgacggcgttaacgcagccgatccggaagac
gacgacgattcggaagagtttccgcggttcatgacgccgctgatgttggccgcgcagtgc
ggcctgtacgagactgtcgagtacctggtgaaccgcggccacaagctggacaggccgcat
ccaccacggtgcacctgcagtgaccggtgcatggtctcggcttcgcgcgccgacgcggtg
gccgacagctgcaaacggctgaacgggtactgggccatcagcaacccgacgttcatatgc
accacgtcttccagttccgatccggtactcgagtgcttccggttgcacgaagagctgttg
cggtgcggatccgccgaacaggtgcacaacgctacgtacacgtatatggccgcacaggtt
agacaattcgcggtggaaatgatagtgaactgcaggacgtcggacgaagtcaagatcatg
ttgcgaaatcgggacggttgcaagttcagaggtcagttcccgtacccgagactgatcacg
gctatggactacaagcagaaggagttcgtagcgcacatcaacatccaacaggtgctggaa
accgcgtggctgggcgactggatcgagtggaaggcgtactcggggccgcggaagttggcg
tacctgctgtggcggttctgcatgctgccggtgacggtggcgctgggaatgctggcgccc
aactcgaagctgaaccagttcaaccggttgccgatcaaccggatgttcaacagcctggtc
acctacctggtgttcctcgggctgctgttcgcgcactcgaacgccgacaagttcaagacg
cacaggggcgcgccggaactgcgcacgtggctgccgatcgtcgtgttcgtgctgggccac
gtggtggagaagacgaagctgcggctgcagcagggcccgggccggttcttcaagaacctg
tggaacgtgttcgacacggtcaagctgacgctgttcgtcgtcgcgttcctgtgctgggcg
gtggccggcgtccgggccggccgcgagtcggaccatcacctggaccgcaagtactggcac
tgggccgacccgcagctgctggccgagggcctgttcaccgtggccaccgtgatggcgtac
ctgcggctgctgttcctgtgccagctcaactactacgtggggcccatgcaggtgtccctg
ggcaaggtgctgcacgacttcggcaagttcgccacgttcctggtgatcatcatggcggcg
ttcacgtgcggcctgggcacgtattactcgtattacgcgggcatggtgtacagggacccg
gagacgggcgagaccaccaggcaggaggactcgttcgtcacggtggccgacacgttcaag
acgctgttctggggcatattctgcatgacgtcgctggacgcgcccaacgtggtggtcggc
aacgcggccccggccaccgggcgcgtggacgccgaggcgcagacgcaccagttcacgcag
ctggtgggctacgggctgttcgccgtgttcgaggtgctcatggtggtggtcatgatgaac
atgctcatcgccgccatgtcggacacattccagggcgtcaccgacaacgccgagtacgag
tggctgttcggccggacgaaggtgtacgtcagctacatgctgcaggacgacctgccgccg
ccgttcaacctgttgcccaccacggggctgctgttctgcgccaagcggtacgtgtccaag
tcgtcgcggggctacggcctattgccgggcgacgacggccggggcgacttcgacagccgc
tcgacggccgcggcccccgagttccgcgacctcatggccgagatcgtcaagcggtatttc
accatgcacagggcgcccgccgaacactga
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