Rhopalosiphum maidis (corn leaf aphid): 113559011
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Entry
113559011 CDS
T06065
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113559011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113559011
03016 Transfer RNA biogenesis [BR:
rmd03016
]
113559011
03012 Translation factors [BR:
rmd03012
]
113559011
04131 Membrane trafficking [BR:
rmd04131
]
113559011
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rmd04147
]
113559011
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
113559011
Transfer RNA biogenesis [BR:
rmd03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
113559011
Translation factors [BR:
rmd03012
]
Eukaryotic type
Elongation factors
113559011
Membrane trafficking [BR:
rmd04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
113559011
Exosome [BR:
rmd04147
]
Exosomal proteins
Proteins found in most exosomes
113559011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
113559011
NCBI-ProteinID:
XP_026820403
LinkDB
All DBs
Position
4:41011261..41014757
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEARFEEIKKEVSSYIKK
IGYNPAAVAFVPISGWNGDNMLEVSDKMSWFKGWNVERKEGKADGKCLIEALDAILPPSR
PTDKALRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVVFAPANITTEVKSVEMHHEALV
EAVPGDNVGFNVKNVSVKELRRGFVAGDTKNNPPKGAADFTAQVIVLNHPGQISNGYTPV
LDCHTAHIACKFAEIKEKCDRRTGKTTEANPKAIKSGDAAIINLVPSKPLCVEAFSEFPP
LGRFAVRDMRQTVAVGVIKSVNFKDPSAGKVTKAAEKAQKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagaaaaggtacatattaacattgttgtcattggacacgtcgattctggtaaa
tcaacaacaactggtcacttgatctacaaatgtggtggtatcgacaaacgtacaattgaa
aaattcgagaaggaagcccaagaaatgggtaaaggttctttcaaatacgcatgggtattg
gacaaattgaaggctgaacgtgaacgtggtatcaccattgatattgctttatggaaattc
gaaactgccaagtactatgtcaccatcattgacgcacctggtcacagagatttcatcaag
aacatgatcactggtacttcccaagctgattgtgctgtacttatcgtcgctgctggtact
ggtgaattcgaagctggtatttctaaaaatggacaaacccgtgaacacgctctattggct
ttcaccttgggtgtgaaacaattgatcgttggtgtgaacaagatggactcaactgaacca
ccatacagcgaagcccgtttcgaagaaatcaagaaagaagtcagcagttacatcaagaag
attggttacaacccagctgctgttgctttcgttcccatttctggatggaatggagacaac
atgttggaagtttccgacaaaatgtcatggttcaaaggatggaatgttgaacgtaaagaa
ggaaaggctgatggtaaatgtctgattgaagctttagacgctatcctaccccccagtcgc
ccaactgacaaggctctccgtctcccactccaggatgtctacaaaattggaggtattgga
acagtcccagtaggtcgtgtcgaaactggtttattaaaacctggtatggttgttgtcttc
gcacctgcaaacatcaccactgaagttaagtctgtagaaatgcaccacgaagctttggta
gaagctgttcccggagacaatgttggtttcaacgtaaagaacgtttcagtcaaggaattg
agacgtggttttgttgctggagacacaaagaacaacccacccaagggtgctgctgatttc
acagcccaggttattgtattgaaccaccctggtcaaatttccaatggatacactccagtg
ttggattgccacacagcccacattgcttgcaaattcgcagaaatcaaagagaagtgtgat
cgccgtactggtaaaactactgaagctaacccaaaggcaatcaaatctggagatgctgcc
atcatcaacttggtaccatccaagcccttgtgtgttgaagctttctcagaattccctccc
ttgggacgtttcgctgtgcgtgacatgaggcaaactgttgctgttggtgtcattaagagt
gtaaacttcaaagatccatctgccggcaaagtaacaaaggccgctgaaaaggcccagaag
aagaaatga
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