Rhopalosiphum maidis (corn leaf aphid): 113559112
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Entry
113559112 CDS
T06065
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03030
DNA replication
rmd03410
Base excision repair
rmd03420
Nucleotide excision repair
rmd03430
Mismatch repair
rmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113559112
03410 Base excision repair
113559112
03420 Nucleotide excision repair
113559112
03430 Mismatch repair
113559112
03440 Homologous recombination
113559112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rmd03032
]
113559112
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113559112
Enzymes [BR:
rmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
113559112
DNA replication proteins [BR:
rmd03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
113559112
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
113559112
MMR (mismatch excision repair)
DNA polymerase delta complex
113559112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
113559112
NCBI-ProteinID:
XP_026820511
LinkDB
All DBs
Position
4:41028302..41036911
Genome browser
AA seq
1090 aa
AA seq
DB search
MFNKKRPNSSDKQGNFNKKFKVEDDEQLMFENDLAIMEEMEKELESSPDLLGEGPDQEDS
SALWSRPAMKEINPATESLAFQQLTIDNYIGEPIQGMSGAQTGLVPITRMFGITMDGNSV
CCNVHGYSPYFYTTAPEGFGPEHCKEFKTRLNAVVLSDMRGNQNRVQEPVLMVEIVQKIN
LYGYHGEELEKYLKITMALPKLVPAAKRLLEKETVLPTFSGHNYRMFETNVDYDMRFMVD
LKIVGCSWIELPAGSYTIRDSNSKLKGQSRCQFEVDVGWQKIIAHAPEGEWSKVAPFRIL
SFDIECAGRKGIFPEADKDPVIQIANMVQIENKRLIRNVFTLNTCAPIVGSQVISCEKEN
NMLEKWAAFVRECDPDIITGYNINNFDLPYLLNRAKHLNSKNFNFLGRIKNIQSIIREQV
IQSKQMGRRENKSVNIDGRVPFDLYLVLVRDYKLRSYSLNSVSYHFLQEQKEDVHHSIIT
DLQNGTPQTRRRLAVYCLKDAFLPLKLLDKLMCLINYMEMARVTGVPLGSLLTGGQQAKV
VSQLLRLAQEKNYIMPTMAGGMQDEQFEGATVIEPIKGYYADPIATLDFTSLYPSIMMAH
NLCYTTLLTQKTINLLNLSESDYSKTPSGSYFLSKSIRKGLLPEILENLLSARKKAKTDL
KSETDPFKIKVLDGRQLALKISANSVYGFTGAQVGKLPCLEISTSVTSYGRMMIERTKQE
VEQKYCIANGYEHDAVVIYGDTDSVMVKFGVKSIEKAMELGREAAEYVTTKFINPIKLDF
EKVYFPYLLINKKRYAGLYFTRPDKYDKMDCKGLETVRRDNSPLVSNMINTCLQKLLIDR
DPDGAVAYAKEVISDLLCNRIDISQLVITKELTKNDYTAKQAHVELSIKMKKRDPGNAPK
LGDRIPYILITGTKGTPAYQRAEDPIFVLENNIPIDFNYYLENQLSKPLVRIFSPILGEK
AESVLLKGDHTRKKAMVTSKVSALSAFTKKKEVCLGCKSVLPTNEEKNALCKYCMPKQGE
LYYQERVKVNDLQEKFCRLWTECQRCQGSLHEEVICTSRDCPIFYLRKKVQIDLTAQVKT
MNRFGNPNNK
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataagaaaagaccaaattcatcggataagcaaggcaactttaataaaaaattt
aaagttgaagatgatgaacaattaatgtttgaaaacgatcttgccattatggaagaaatg
gagaaagaactcgagtcgtcaccagatctcttgggtgagggtcctgatcaagaagactcc
agtgctttgtggagtagacccgccatgaaagaaattaatccagctactgaaagtttagct
tttcaacaacttactattgacaattacattggagaaccaatacaaggtatgagtggtgca
caaactggtttagttcctattactcgaatgtttggaattactatggatggtaattctgta
tgctgtaatgtgcatgggtattctccatacttttacaccaccgctcctgaaggatttggt
cccgaacattgtaaagagtttaaaacccgtttaaacgcagttgttttaagtgatatgcgt
ggaaatcaaaatagagtacaggaacctgttcttatggttgaaatagttcaaaagataaac
ctttatggttatcatggcgaagaattagaaaaatatttaaaaataactatggctttacca
aaattggtacctgcagcaaaaagacttctggaaaaagaaacagtattacctacattttct
ggacataattatagaatgtttgaaactaatgttgattatgatatgcgatttatggtagat
ttaaaaattgttggttgtagctggatcgaacttcctgcaggctcttacacaatacgtgat
tctaattctaaactaaaagggcaatcgagatgtcaatttgaagtagatgttggttggcaa
aaaataatagctcatgctccagagggtgaatggagtaaagttgcaccttttcgaattctc
agctttgatattgaatgtgctggtcgtaaaggtatatttcctgaagcagacaaagatcct
gttatacaaatagctaacatggtacaaatagaaaacaaaagattaattagaaatgtattt
acattaaatacatgtgcacccattgttggtagtcaagttataagttgtgaaaaagaaaat
aatatgcttgaaaaatgggctgcatttgttagagaatgtgatcctgatattattactgga
tataacattaataattttgatttaccatatttgctgaatcgtgcaaaacatttgaattca
aagaatttcaattttttggggcgtattaaaaatatacaatctattataagagaacaagtt
attcaaagtaaacaaatgggtcgaagagaaaataaaagcgttaatattgatggaagagtt
ccttttgatttatacttggtattagtgcgagattataagttacgatcatattcattgaac
tctgtcagttatcattttttacaagaacaaaaagaagatgttcatcacagtattataaca
gatttacaaaatggtacacctcaaacaagacgtcgtctagcagtttactgtttaaaagat
gcgttccttccattgaaactattagataaacttatgtgtttgattaattatatggaaatg
gctagagtaactggtgttccattaggaagtcttttaactggaggtcagcaggctaaagtt
gtatctcaattacttcgtcttgcacaggagaaaaattatataatgcctacaatggctggt
ggtatgcaagatgaacaatttgaaggagcaactgtaatagaacctattaaaggttattat
gctgacccaattgcaacattagatttcacttctttgtatccgagtattatgatggctcat
aatttatgttatactacactgttgactcaaaaaacaataaatcttttaaacttgtctgaa
agtgattattctaaaactccttctggtagttattttttgtctaaatccatacggaagggg
ctattgccagaaattttagaaaatttattgtctgcacgtaagaaagctaagactgatttg
aaatctgagactgatcctttcaaaataaaagtcttagatggtcggcaattggctttaaaa
attagtgcaaattcagtatatggctttactggagctcaagtaggaaagttaccatgttta
gaaatatcgacaagtgttacctcatatggtagaatgatgattgagcgtactaagcaagag
gtcgaacaaaaatattgcattgcaaatggttatgaacatgatgctgtagttatttatgga
gacaccgattctgtcatggtaaaatttggagtgaaatctattgaaaaagcaatggaattg
ggacgtgaagcagctgaatatgtaacaacaaaatttataaatcctataaaattagatttt
gaaaaagtttattttccttatttattaattaataaaaaacgttatgctggcctttatttt
acacgacctgacaaatatgacaagatggactgtaaaggattagaaacagtacgcagagat
aattcaccattagtatctaacatgataaacacctgtttgcaaaaactacttattgataga
gatcctgatggtgcagttgcctatgcaaaagaagttattagtgatttgttatgcaatcga
attgatatatcacagttggtaattacaaaagagttgactaaaaatgattatacagcaaaa
caagctcatgtagagttatcaattaagatgaaaaaaagagatcctggaaatgcaccaaag
ttaggtgaccgtataccatatattctaattacaggcaccaagggaacaccagcatatcaa
cgagcagaagatccaatatttgtcttagagaataatatacctattgattttaactattat
ttggaaaatcaactatccaagcctttggtcagaattttttcacctattctcggggaaaaa
gcagaatctgttttgttgaaaggtgatcatacgcgtaaaaaagccatggtaacatctaaa
gtgagtgcattatcagctttcacaaaaaaaaaagaagtttgtttagggtgtaaaagtgtt
ttgcctactaacgaggagaaaaatgctttatgtaaatattgtatgcccaaacaaggtgaa
ttatattatcaggaacgtgttaaagtgaatgatctacaagaaaagttttgccggttatgg
accgaatgtcaacgttgtcaaggaagtttacatgaagaagtcatttgcactagtcgagat
tgtccaatattttatttaaggaaaaaagttcagattgacttaactgctcaggtgaaaaca
atgaatcgatttggaaacccaaataataaatag
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integrated database retrieval system
