Rhopalosiphum maidis (corn leaf aphid): 113559258
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Entry
113559258 CDS
T06065
Name
(RefSeq) transcription factor Sox-2-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113559258
Transcription factors [BR:
rmd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113559258
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Itfg2
EOS1
Motif
Other DBs
NCBI-GeneID:
113559258
NCBI-ProteinID:
XP_026820714
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Position
3:complement(26431697..26438047)
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AA seq
470 aa
AA seq
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MLMDAEIKNCSGLLAGGVHHASAHMGHTYGNLNQMGMLAGIGSAGVVLGGPQGGGQQPLS
SPPPSQQQQQQSALHQQQQQQQQQQQQQQQQQQQQQQQQHHQHMQAAHHHHQVGGHVVGG
QLQLPSPNNNNSSSANKNQNVDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGS
EWKMLTETEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKTKTLMKKEKYPLPGAGGPLSLG
GAGGQPCDNSVGGRNAVSQASAAVQQQMVSNSRELYHQMNGYMPNGGFGMHHDPNPYAQQ
PSPYASHMAAASQAAASYRYDMPQMNNNAAAAASMHYLNGSYNLYSDMNQYQQGPPSTSH
SPDSIKSERISPPVQSGGHSPSPRLCQQQQLHQQQQQQQQQQQQQLGGNDLLRMYMPLES
RLSAAAQGHQQPGVHGHPYLSHGQQQNLVQQTHPHSMSPDLQMGHLGHHM
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggacgccgaaataaaaaactgttccggcctgttggctggtggagtgcaccac
gcatccgcgcacatgggccacacgtacggaaacctcaatcagatgggcatgttggccggt
atcggttctgcgggcgtcgtgctcggcggaccgcagggcggcggacagcagccgctctcg
tcgccaccgccgtcgcaacagcaacagcaacagtccgcgctgcaccagcaacagcagcag
cagcagcaacagcaacaacagcagcaacagcaacagcaacaacagcagcagcagcaacac
catcagcacatgcaggccgcgcaccaccatcatcaggtgggcgggcacgtcgtcggcggt
cagctgcagttgccgtccccgaacaacaacaactcgtcgtcggccaacaagaaccagaac
gtggaccgggtcaagcggccaatgaacgcgttcatggtgtggtcccgcggacagcgccgc
aagatggcccaggagaacccgaaaatgcacaactcggagatcagcaagcggctgggcagc
gagtggaaaatgctgaccgagaccgagaaacggccgttcatcgacgaggccaagcggttg
cgcgccgtgcacatgaaggaacacccggactacaagtaccggccaaggcgcaagactaag
acgctgatgaagaaggaaaagtacccgttgccgggcgcgggcggcccgctgtctctgggc
ggtgccggcggacagccgtgcgacaactcggtgggcggccggaacgccgtgtctcaggcg
tcggccgctgtccagcagcagatggtcagcaacagccgcgagctgtaccaccagatgaac
ggttacatgcccaacggcgggttcggcatgcaccacgacccgaatccgtacgcgcaacag
ccgtcgccttacgcgtcgcacatggccgccgcttcacaggccgccgcgagttaccggtac
gacatgccgcagatgaacaacaacgcggccgccgccgcgtccatgcactacttgaacggc
agctacaacctgtactcggacatgaaccagtaccagcaggggccgccgtccacgtcgcac
agcccggacagcatcaagtccgagaggatctcgccgcccgtccagtccggcggacattcg
ccgagtcccaggctgtgccagcaacagcagttgcaccagcaacagcagcagcagcagcaa
caacaacagcaacagctgggaggcaacgatctgctccgcatgtacatgccgctcgagtcc
aggctgtctgcggccgcccagggacaccaacagcccggcgtccacggccacccatacctg
tcgcatggccagcagcagaacctcgtgcagcagacccatccgcactccatgtcgcccgat
ctccagatgggccacttgggccatcacatgtaa
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