Rhopalosiphum maidis (corn leaf aphid): 113559638
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Entry
113559638 CDS
T06065
Name
(RefSeq) ATP-dependent RNA helicase vasa-like
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmd03036
]
113559638
Enzymes [BR:
rmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113559638
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113559638
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
113559638
NCBI-ProteinID:
XP_026821189
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Position
3:5447148..5453103
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AA seq
677 aa
AA seq
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MAENWDNIPGINQEYGQLDQNATDSQTDENDWNNLAQNFKRKYKACTNYTDWDPINNNGH
TDDDKLIEEFFENKTTTIESSGDTNAGRDDSSQTTSDVVEHQADTASYYENNEQINIECT
DSNSLNDSWGNPISSDRYNNDIGNNSELNGSTKKNNYNDYHPGNSWSNDIETNNYQKYEK
NGYHENVRSHQQSTRFPKKSNNDKRNGKFEKPIIQKSTYIPPEFEENDDLTLEAGLNFEK
YDKIEVTVSGMEVPKNITSFQDSGLRQVLISNLTKCHYTIPTPIQKYAIPIIMNGKDMIA
SAQTGSGKTAAFVLPILNNLISEPAELIVDYNHCEPQALILSPTRELAIQICEVTTRLSR
NTSIKCELLYGGTATYHQKERILRGGVHIIVATPGRLIDFVNRGLITFSSLRFFVLDEAD
RMLDMGFSLDIEHILNDNTMVSSAERSTVMFSATLPMDVQHIAKSYLKPDYISVAVGVVG
GACKDVTQTFIEVNKFSKKNALVAMLNETNDCQGTIVFVEQKRQADFIAAFLSELNYPTT
SIHGDREQPEREKALRDFKTKKMKVLVATAVAARGLDIMGVTTVVNFDLPKTIEEYVHRI
GRTGRLGNSGRAVSFFDPANDHAMAPYLVNTLKLADQKVPEFLSQYSGKVQKPLNQFNDI
RSNVPVTSEYVQEEEEW
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaattgggataatataccaggaataaatcaagaatatggacaattagaccaa
aatgcaactgatagtcaaacagatgaaaatgattggaataatttagcccaaaatttcaaa
cgtaaatataaagcatgtacaaattatacagattgggaccctataaataacaatggtcat
accgatgatgataaattaattgaagaattttttgaaaataaaactacaactattgaatct
tctggtgatacaaatgcgggtcgtgacgactcatctcaaacaacatctgatgttgttgaa
catcaagctgatactgctagttattatgaaaataatgaacaaatcaatattgaatgtact
gattcaaattctttaaatgattcttggggaaatccaatttctagtgatcgatataataat
gacattggaaataattcagaattaaatggtagtaccaagaaaaacaattataatgattat
catcctgggaattcttggagtaatgatatcgaaaccaataactatcaaaaatatgaaaaa
aacggttaccacgaaaatgttcgcagccaccagcaaagcacacggtttcccaaaaaatct
aataatgataaaagaaatggtaaatttgaaaagcccatcatacaaaaatcaacttatatt
cctccagaatttgaagaaaatgatgacctaacactagaagcaggattgaattttgaaaaa
tacgataaaattgaagtaacagtaagtgggatggaagtacccaaaaacataacatcattt
caagattctggtttgcgtcaagtattaataagcaatttaaccaaatgtcattatactatt
ccaactccaatacagaagtatgctataccaatcattatgaatggaaaagatatgatagct
agtgctcaaactggttctggaaaaactgcagcttttgttttaccaattttaaacaattta
atcagtgaaccagctgaattaattgttgattacaatcattgtgagccacaagctttaatc
ctgtcacccactagagaacttgctatacaaatatgtgaagttacaactagattgagcaga
aacacttcaataaaatgtgaacttctttatggcggaacagccacttatcaccaaaaagaa
agaattttgagaggtggtgttcatataattgtagctactccagggcgtttaattgatttt
gtcaatcgaggtttaattaccttttcatctttgcgattctttgtacttgatgaagccgac
cggatgttagacatgggtttttcacttgatattgaacatatattaaatgataacactatg
gtgtcatcggcagagagatcaacagttatgttttcagcaaccctgcccatggacgttcaa
catatagcaaagtcttatttaaaaccagattatatatcagtagctgttggagtggttgga
ggtgcctgtaaagatgttacacaaacatttatagaagtgaataagtttagcaaaaaaaat
gcattagttgctatgctaaatgaaacaaatgattgtcagggaacaattgtatttgttgag
caaaaaagacaagctgatttcatagcagcctttctaagtgaacttaattatccgactaca
agtatacacggagatcgtgaacagccggaacgagaaaaagctttgagagattttaaaact
aaaaaaatgaaggttttagtagccactgctgtggctgctagaggactagatataatgggt
gttacaacggtagtgaattttgatctaccaaaaacgattgaagagtatgtgcatagaatt
ggacgtactggtagattgggaaattcaggccgtgctgtttcattttttgatccagcaaac
gatcatgccatggctccatatttagtcaatactcttaaactagccgatcaaaaagttcca
gaatttttatctcagtatagtggcaaagttcagaaacctttaaatcagttcaatgatata
cgatcgaatgttccagtaacatctgagtatgtccaagaagaggaagaatggtaa
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