Rhopalosiphum maidis (corn leaf aphid): 113559640
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Entry
113559640 CDS
T06065
Name
(RefSeq) ATP-dependent RNA helicase vasa-like
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmd03036
]
113559640
Enzymes [BR:
rmd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113559640
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113559640
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Utp25_C
AAA_19
Motif
Other DBs
NCBI-GeneID:
113559640
NCBI-ProteinID:
XP_026821192
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Position
3:complement(5565575..5574666)
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AA seq
575 aa
AA seq
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MSDGSWDDESGFSNQRGRGRGGCRGGRGRGSFNRNNDFDSNSQGEDGWGNSGGGGGGGDW
PGDNDGGSRGRGGRGRGRGGRGGSRMDRNNGDEEGGDFGDDQQPPVSDKPRPTYVPPEID
ENDEYGIGVGSNFDKYENIQVKVSGDSVPKHIESFKSSGLREVLIEKLVKCNYTTPTPIQ
KYAIPIIISGRDMMATAQTGSGKTAAFVLPIVHTLLSNSQDLVFDRNYCEPQCVIMSPTR
ELAIQIRDVVYKLTQGTCIRQSILYGGTATGYQRNTLANGIHILVATPGRLNDFVGRGYV
SFKSLRFFVLDEADRMLDMGFKPDIEKILNHETMVDIHTRQTLLFSATLADDIQMLSEAY
LKPNYVFVAVGEIGGACKDVKQEIREVSKFEKKKELIKVLESLGDCQGTMVFVEQKRNAD
FIAAFLSEKDYPTTSIHGDREQPEREQALRDFKNNKMKILVATAVAARGLDIKGVNCVIN
FDMPSSIDEYVHRIGRTGRLGNSGRAVSFYDSSSDNNLSSELVRILKQAEQEVPSFLDGR
GFYGGNSYGGSSNACNDVRQTSQPAAAAAAAEDEW
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacggtagttgggatgatgagtctggtttttcgaaccaaagaggccgtggtcgt
ggtggttgccgaggaggtagaggaagaggaagctttaatagaaataatgattttgactct
aattcacaaggtgaagatggttggggtaatagtggtggtggtggtggtggtggtgattgg
cctggtgacaacgatggtggatcacgtggccgtggtggacggggtagaggaagaggaggt
agaggaggaagcagaatggatagaaataatggtgacgaggaaggtggtgattttggtgat
gaccagcaaccaccagtttctgataaacctagaccaacatatgtacctccagaaattgat
gaaaatgatgaatatggaattggtgttggaagcaatttcgataaatatgaaaatattcaa
gtaaaagttagtggtgattctgtccccaaacatattgaatcctttaagagttcaggtttg
cgtgaagtattaatagaaaagttggtcaaatgcaattatacaacacctacgccaattcag
aagtatgctattcctattatcattagtggacgagacatgatggctactgcccaaactggt
tctggtaaaactgccgcatttgttttgccaattgtgcatactttactctctaactcacaa
gatttagtttttgatcggaattactgtgaacctcaatgtgttattatgtcaccaactaga
gagttagccatacaaattcgtgatgttgtatataaattgacgcaaggaacttgtattaga
caatcaattctctatggcggaactgcaacaggatatcagaggaatacacttgctaacggt
atccatatattagttgcaacacctggacgtttgaatgattttgtgggtcgaggatacgta
tcatttaagtctttaaggttctttgtgttagatgaagctgatagaatgttggatatgggt
ttcaaaccagatattgaaaaaatattgaaccacgaaacaatggtggatattcatactaga
caaacacttttattttctgctacgttggcagatgatattcaaatgttatctgaagcttat
ttaaagccaaactatgtgtttgtcgcggtgggtgaaattggaggtgcttgtaaagatgtt
aaacaagaaataagagaggtctccaagttcgaaaaaaagaaagaactaattaaagttttg
gaatccttaggggattgtcaaggaaccatggtttttgtagaacagaaaagaaatgccgac
ttcatcgctgcatttttaagtgaaaaagattatcctactactagtattcacggcgatcgt
gaacaaccagagagagaacaagcattaagagattttaaaaataataaaatgaaaatattg
gttgctactgcagttgctgctagaggcctagatataaaaggtgttaattgtgttataaat
tttgatatgcccagctctattgatgagtatgtgcatcgaattggccgaacaggaagattg
gggaattctggtagagctgtttcattttatgacagtagcagtgacaataacttatcatca
gagcttgttaggattctaaaacaggctgaacaggaagtgccatcatttttagatggtaga
ggtttctatggaggaaattcttatggtggaagtagcaatgcttgcaacgatgtcagacag
acttcgcaacctgctgctgctgctgctgctgctgaggatgaatggtga
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