Rhopalosiphum maidis (corn leaf aphid): 113559681
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Entry
113559681 CDS
T06065
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rmd03041
]
113559681
Spliceosome [BR:
rmd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113559681
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
Ig-like_CATSPERD
Motif
Other DBs
NCBI-GeneID:
113559681
NCBI-ProteinID:
XP_026821231
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All DBs
Position
3:complement(9715492..9719590)
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AA seq
687 aa
AA seq
DB search
MPDQKQSINLQKKSNTTLNEESRKIAAKLKSEDKTSIEGKSKHDEEMLVNNQESVGNTKQ
KLENQVFSDKASMEDDDIYNKESVDGELIPEDKICIVNKPRAKYGPSFSLQINNQESGEC
SAKFSLEDEKRVNNKEPIERNSKNLLEGEKCINNKSDSEDGLPPTTIVEKHQCDILPCSL
KTLSTTVVDNRKRYQNQNEDLDKNEPCSLKKIKIEKTCEYQFQQIWKHLERDPSNFKEWT
HLLNVIDYQNIEVNSRMAYSKFLELYPLCYGYWKKYANFEKRINNIHGFKKVLENSLSSI
PISVDLWTYYMSYLRLEHRNEEDLIRKEFERSLKMCGLDYRSDKLWHDYISWEVEKNEIF
NAVNIYYRLIRIPTSNYLKNFFKFQEFIFKNLPEKCLGLAEFTKRRNIIIESHEQILDRN
SFVDDSIPPGEDSLQITEYTENSIMSILRIDIIESWYNIHKQTAKEFESRKKFEENIRRT
HFHVKELESNQIKNWENYIKFEKKSGNHERIIFLYERCLITCVSNEGLWLNYLEYLSFVN
LDVNALLVDVFKRSLFHHPKSLLLNLKYFDFSENKGWIEKAIETITKLGIIYPNSRDVTT
RIMHLARRKEDETLKILFKHHLNCSQTKSFSNYVAVKYARFVWKHDRQLNLALDILNDTI
RKNNSVNNSGILRALIFRQASPDCGPK
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcaaaaacaatccattaatctacaaaaaaaaagtaacactactcttaatgaa
gagtctaggaaaattgctgctaaattgaaatcggaagacaaaacaagtattgaaggtaaa
tctaagcatgatgaagaaatgttagtaaacaatcaagagtctgttggtaatactaaacaa
aaactcgaaaaccaagtattttcagataaagcatctatggaagatgacgatatatataat
aaagagtcggttgatggtgaactaatacctgaagacaaaatatgcattgtcaataaacct
agggcaaagtatggaccatcgttttctcttcaaattaacaaccaagaatctggtgaatgc
agtgccaagttctctcttgaagatgaaaagcgggttaataataaagaacctattgaaaga
aatagtaagaatttactggaaggtgaaaaatgtattaacaataaatctgattcagaagat
ggactaccgccaactactattgttgagaaacatcaatgtgacattttgccatgtagcctt
aaaacattgtctacaactgtagtagacaatagaaagcgttaccaaaatcaaaacgaggat
ttagataaaaatgaaccatgctctttaaagaaaattaaaattgaaaaaacttgtgaatat
cagtttcaacagatatggaaacatcttgaacgagacccttcaaatttcaaggaatggaca
catttattaaatgtaattgattaccaaaatattgaagttaactcaagaatggcttactct
aaatttctagaactatatccactttgttacggttactggaagaaatatgctaattttgaa
aaaagaattaataatatacatgggtttaaaaaagtattagaaaatagcttaagttccata
cctataagtgttgatttgtggacttattacatgtcatatctgagattggaacatagaaat
gaagaggatcttattcgtaaagagtttgaaagaagtttaaaaatgtgtggacttgattat
cgttctgataagttatggcatgattacatatcatgggaagtggaaaaaaacgaaatattt
aatgcagttaacatatactatcgtcttattcgtataccaacttcaaactatctaaaaaat
ttcttcaaatttcaagaatttatattcaaaaatttacctgaaaaatgtttaggtcttgca
gagtttactaaaagacgaaatataataattgaatcacatgaacaaatattagatagaaat
tcatttgttgatgattctataccacctggcgaagatagtttacagataactgaatatact
gaaaatagtataatgtccatattaaggattgatattattgaatcatggtacaatattcac
aagcaaactgccaaagaatttgaaagtcggaaaaaatttgaggaaaatatacgaagaact
cactttcatgtaaaggagttagagtctaatcagataaaaaattgggaaaactatattaag
tttgaaaaaaaatctggaaaccatgaacgcattatttttctatacgaaagatgcttgata
acgtgtgtttcaaatgaaggattatggttaaattatttagaatatttatcctttgtaaat
ttagatgttaatgctttattagtagatgtattcaaaagatcattattccaccatccaaag
tcactcttgctaaatttgaaatattttgatttttccgaaaacaaaggttggatagaaaaa
gctatcgaaactataacaaaattagggatcatttatccaaattcaagggatgttactact
agaataatgcatttagctagaagaaaggaagatgagaccttaaagattttatttaagcat
catttaaattgttctcaaacaaagtctttttccaattacgttgcggtgaaatatgcacgt
tttgtttggaaacacgatcgacagttaaatctcgcgcttgatattttaaatgataccata
cgaaaaaacaactcagtaaataattcgggcattctacgggcccttatattcaggcaggcg
tcgcccgattgcggccctaagtaa
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