Rhopalosiphum maidis (corn leaf aphid): 113559798
Help
Entry
113559798 CDS
T06065
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04150
mTOR signaling pathway
rmd04310
Wnt signaling pathway
rmd04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113559798
04150 mTOR signaling pathway
113559798
09133 Signaling molecules and interaction
04519 Cadherin signaling
113559798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113559798
Membrane trafficking [BR:
rmd04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113559798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
EGF_LRP2
SGL
Vgb_lyase
LRP1-like_beta_prop
Asp
LDLRAD1_C
Motif
Other DBs
NCBI-GeneID:
113559798
NCBI-ProteinID:
XP_026821357
LinkDB
All DBs
Position
3:13403796..13414975
Genome browser
AA seq
1660 aa
AA seq
DB search
MPTTRPDAQQRSVGRVADQSPPPQRRRCASRPLSRRTTARREPCAVAAAAAAAAVITDHN
TGTNARSTIATVLTETSWTPVTRKCARMTSPWIFVMLYCTAMMSLVNAYPNLIYTTSKDI
RMANMSKMTRINVIVKDLIEGSALDFYYKGSLICWADHGQESIQCVSYNGTHATNKVAIL
NTGIITPDGLACDWLTKKIYWTDGDTNRIEVASLDGKYRKVLYWEDIDQPRAVALVPMDG
IMFWTDWGEVPKIERAGMNGDLSTRKVIVSDNIFWPNGLTIDFYTKHIYWVDGKLGFIDI
MDYDGRNRKTILEKGIPYPYGIALYQDRLYWTDWKTWSIHVVNRSGGGNSREIIHSNNVP
MDIRVWNPARQPEKITLCDKNNGGCSDLCLLSPNSPGYSCACSTGIKLIDYHNCAEGVQE
VLFLVQKTDICQISLDSPDHTIMSIPLTGLAHAIAIDYDPVDGYIYWTDDEIKMIQRAKM
NGSNQGVVISNEIYHPDGVAIDWVARNIYWTDTGTDRIEVARLNGKHRRVIIANDLVEPR
GIAVAPELGWLFWSDWYDKRPKIERSNLDGNDRIILLKDDLGWPNGITLDIKARTLYFCD
AKTDRIEVVGMNGEDRKELVSENLPHVFGLTQLGDYLYWTDWQRRTIDRVNKNTGSDRKI
IIDQLPNLMGVKAINLKEPLNDNPCGDNNGNCSQFCFYKPKGYYICACEIDYELAMDGKT
CILSESFLIFARSEHIGILSTENSHYSDIIPIAGMKEASAVDVDIKNKRVYWTDIKLKTI
NRVYLNGSMAERIITFGLQSPEGLAVDWIGGNLYWCDSGTKRIEVSRLDGTMRKVLLWND
IKNPKNLLLNPKKGFMYWSELDGITGSIHKASMNGEGKHCLINKIGRVISITSDYDSGLI
YWTTLTPNSGSIESIDFNGRRQSKIVSIPFGGYLSAITYFRGSLYWLDWSNGTYFQVDIQ
SGTILKQTKINLDHVTDLITFDKASQTGTNPCAINNGGCQQLCLVKGSTRDHEPLSYHCS
CETHFTLFKNNTCSAPNSFLIVAQKTTFYRVVMDIDDSSDSSLPVIGLKHVKAVEYDPIS
HMIYWIDGRTQMIKRCHENGSNPSMFIGNNGNTYNLYDLALEPYNRLLFWTCTVTDTINV
TRLTNSSFQGSIFKSFDGEKPRNLAIHPEKGYIYWTDLGSQHRVIRSRIDGHNRVIIASD
LLSLEALTVDRVQNMVYFSYSSKVDVCDLHGYQRKTLISFDGALITNIAVLGPYLYWIDK
EKQVIERVNKSTGVVSEGSTVMNQNPHLVDIISIYIPTPEILASHPCSAMNKHGMCSHLC
IVTGVNESTSSNHQCSCPLGLIMSDRQCVNVPVCGPEQFICNSLSPECMPLIWRCDGQTD
CHDGSDEVNCSECSRQQFKCLDGRCIDKNWVCDGTKQCSDGSDESRCCESGLLSNDRYQC
ISNGACIPVKEVCDGWKHCIDGSDETYLACSLIRNVGHTTSPTSDKSFKDTLFFTIIFFV
TVFSLLLVIIYRCAKSDLDHSPSLTSNNIVTYTAIPIPRQYSSTSAYTAMQNGTHIDLIS
PSNCSPLNPPPSPTTTLTMQTNDYIRTNQYLRYDDRYEPPCPTLCSQTDLPTDIYDDSDF
AMPLEPCPPPPTPRSHSPSSSTYFSPNAPPPSPNSCKRLC
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgacgaggccggacgcgcaacagcgatccgtcggccgagttgctgatcagtcg
cctccaccacagcgaagacgatgcgcatcacgaccattgtcccgtcggacgaccgcccgt
cgtgaaccttgtgccgttgctgccgccgccgccgccgccgccgtcattaccgatcacaac
accggcacgaacgctaggagcacgatcgccactgttttaaccgagacgtcctggacacca
gtcaccaggaaatgcgccaggatgacgtcgccgtggatttttgtgatgctgtactgcacc
gcgatgatgtcgctcgtcaacgcttatccaaatttgatatacaccacatctaaggatatc
cgaatggctaatatgtcaaaaatgactagaattaatgttattgttaaagatctcatcgaa
ggaagtgcacttgatttctattataaaggatctttgatatgctgggctgatcatggtcaa
gaatctattcaatgtgtttcttacaacggaactcatgccactaacaaagtggcaatattg
aacactggtattattacaccagatggtttagcttgtgactggcttactaaaaaaatatat
tggactgacggagatactaatagaattgaagttgcatcattagatggaaaatatagaaaa
gtactttattgggaagacattgatcaaccacgtgctgtagctttagttcctatggatggt
ataatgttttggaccgattggggtgaagttccaaaaattgaacgtgcaggaatgaatgga
gatttatctacaagaaaagtcatagttagtgataatatattttggccaaatggcttaact
atagatttttataccaaacacatctactgggttgatgggaaacttggttttattgatata
atggattatgatggtagaaataggaagactattcttgaaaaaggaataccatatccatat
ggtattgctctatatcaagatagattatattggactgattggaagacatggtcgattcat
gtagtaaatcgtagtgggggtggtaatagccgtgaaattatacatagtaataatgtacca
atggatatccgtgtgtggaacccagcccgacagccggaaaaaattaccctctgtgataag
aataacggaggttgttcagatctgtgtcttctctctccaaattctcctggatattcatgt
gcttgttccacaggaataaagcttatagattatcataattgtgcagaaggtgtccaagaa
gtcttatttcttgtacaaaaaactgatatctgtcaaatatcattagattctccagatcat
actattatgtctatacctcttactggtttggctcatgcaattgccatagattacgaccct
gttgatgggtatatttattggactgacgatgaaataaaaatgattcaacgagcaaaaatg
aatggtagtaaccaaggagttgtcatttccaatgaaatatatcatccagatggagtagcc
attgactgggttgcaagaaacatatattggactgatactggaacagatagaattgaagtt
gcaagattaaatggaaaacacagaagagttataattgctaatgatttggttgaacctaga
ggtatagctgtagcacctgaattaggttggctattttggtctgattggtatgacaaaaga
cccaaaattgaacgttccaatttagatggaaatgatagaattattttacttaaagatgat
ttagggtggccaaatggaataacattggatattaaagcaagaactctttatttttgtgat
gcaaaaactgatagaatagaagttgttggtatgaatggggaagaccgtaaagaacttgtg
agtgaaaatttgccgcatgtatttggtttgacacaattgggtgactacctttattggact
gattggcaacgtcgtacaattgacagagtgaataaaaatactggatctgaccgtaaaatc
attatagatcaactaccaaatttaatgggtgtaaaagctataaatttaaaagaacctctt
aatgacaatccatgcggtgataataatggaaattgtagtcaattttgcttctataaacct
aaaggctactacatttgtgcatgtgaaatagattatgaattggccatggatggaaaaact
tgcatattgtctgaatcgtttctaatatttgctcgatctgaacatattggaatattaagt
actgaaaatagtcattattcagatattattcctatagctggaatgaaagaagccagtgct
gttgatgtcgacataaagaataaacgagtttattggactgacattaaattaaaaacaatt
aatagagtttacttaaatgggtcaatggcagaaagaattattacgtttggcctacaatct
ccagaaggattagccgttgattggattggtggtaacttatattggtgtgattcaggcact
aagcgaattgaagtatcaagattagatggaaccatgcgtaaagttttgctttggaatgat
attaaaaatccaaaaaatttattacttaatcctaaaaaaggatttatgtattggagtgaa
ttagatggcattactggctcaattcataaagcatcaatgaatggtgaagggaaacattgt
ttgataaataagattggtagagtcataagtattacttcagattatgatagtggtttgatt
tattggacaacgttgacaccaaatagtggatccatcgaaagcattgattttaatggaaga
cgtcaaagtaaaattgtgtctattccttttggtggttatctttctgccataacatatttc
aggggttctttatattggttggattggtcaaatggaacttatttccaagtcgatattcaa
agtggtacaattttaaagcagactaaaataaatttagatcatgttacggatttgataacc
tttgataaagcaagtcaaactggaacaaatccatgcgctataaataatgggggatgccaa
caattatgtctcgtaaaaggatcaacaagagatcatgaaccattatcatatcactgttca
tgtgaaacacatttcacattatttaaaaataacacttgctcagcaccaaatagtttcttg
attgtggcacagaaaacaacattttatagagtggtaatggatatagacgattcttcagat
tcttcactccccgtcataggattgaaacatgtaaaagcggttgaatatgatccaatatca
cacatgatttattggattgatggtagaacacaaatgataaaacgttgccacgaaaatggt
tcaaatccgagtatgtttattggaaacaatggaaatacatacaatttatatgatctcgct
ttggaaccatacaacagattgttgttttggacttgtacagtaacagatactataaacgtt
actcgtttaacaaatagcagcttccaaggttctatctttaaaagttttgatggagaaaaa
ccaagaaatttggcaatacatcccgagaaaggttatatttattggactgatttgggaagt
caacacagagtaataagatcccgtattgatggccataatagagttattatcgcctctgat
ttgttatctcttgaagcacttactgttgacagagtacaaaatatggtttatttttcctat
tcaagtaaagtagacgtttgtgatcttcatggttatcaaaggaaaacgttgatttcattt
gatggagcacttatcaccaatatagctgttcttggaccatatttgtattggatcgataaa
gaaaaacaggtgatagaaagagttaataaatccactggtgttgttagtgaaggcagcact
gtcatgaatcaaaatccacatttagtagacataatttcgatatacatccctacacctgag
attttagcatcgcatccatgtagtgcaatgaacaaacacggtatgtgttcacacttatgc
attgtcactggagtcaatgagagtacatccagcaaccatcaatgctcttgtcctctaggt
ctgataatgagtgaccgccaatgtgtgaatgtaccagtttgtggccccgaacaatttata
tgcaattctctaagtcctgaatgtatgcctttgatatggcgttgtgacggccaaacagac
tgtcatgatggttcggatgaagtcaattgttcagaatgtagtagacaacaattcaaatgt
ttagatggtcgttgtattgataaaaactgggtgtgtgatggtactaaacaatgttctgat
ggttcagatgaatctcggtgctgtgaatctggattgctttcaaatgatagatatcaatgc
atttctaatggagcatgtataccagttaaggaagtttgtgatggttggaaacattgtatc
gatggatctgatgaaacttatttggcttgctcgttgattagaaatgtgggacataccaca
agccccacaagtgacaaatcattcaaagacactttgtttttcacaataattttctttgta
acagtatttagtttgttgttggtcattatttatcgttgtgctaaaagtgatctagatcat
agtccaagtctcactagtaataatatagtcacgtacactgctataccaattcccagacaa
tattcttcaacatctgcttatacggcaatgcaaaatggaacgcatattgatttgatctca
ccatcaaactgcagccccctgaatccaccaccgagtcctacaaccacgcttacaatgcaa
acaaatgattacatcagaacaaatcaatacctgcgatatgatgatcgttacgaacctcct
tgccccacattgtgttcacaaactgacttgcccaccgatatttatgatgattctgatttt
gcaatgcctctcgaaccttgtcccccaccccctactcctcgatcccattcgccatcatca
agcacttattttagcccaaatgcaccaccgccatcacctaatagctgtaaaaggctttgt
tga
DBGET
integrated database retrieval system
