Rhopalosiphum maidis (corn leaf aphid): 113559798
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Entry
113559798 CDS
T06065
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04150
mTOR signaling pathway
rmd04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113559798
04150 mTOR signaling pathway
113559798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113559798
Membrane trafficking [BR:
rmd04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113559798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
DUF5050
EGF_LRP2
SGL
Vgb_lyase
Asp
Motif
Other DBs
NCBI-GeneID:
113559798
NCBI-ProteinID:
XP_026821357
LinkDB
All DBs
Position
3:13403796..13414975
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AA seq
1660 aa
AA seq
DB search
MPTTRPDAQQRSVGRVADQSPPPQRRRCASRPLSRRTTARREPCAVAAAAAAAAVITDHN
TGTNARSTIATVLTETSWTPVTRKCARMTSPWIFVMLYCTAMMSLVNAYPNLIYTTSKDI
RMANMSKMTRINVIVKDLIEGSALDFYYKGSLICWADHGQESIQCVSYNGTHATNKVAIL
NTGIITPDGLACDWLTKKIYWTDGDTNRIEVASLDGKYRKVLYWEDIDQPRAVALVPMDG
IMFWTDWGEVPKIERAGMNGDLSTRKVIVSDNIFWPNGLTIDFYTKHIYWVDGKLGFIDI
MDYDGRNRKTILEKGIPYPYGIALYQDRLYWTDWKTWSIHVVNRSGGGNSREIIHSNNVP
MDIRVWNPARQPEKITLCDKNNGGCSDLCLLSPNSPGYSCACSTGIKLIDYHNCAEGVQE
VLFLVQKTDICQISLDSPDHTIMSIPLTGLAHAIAIDYDPVDGYIYWTDDEIKMIQRAKM
NGSNQGVVISNEIYHPDGVAIDWVARNIYWTDTGTDRIEVARLNGKHRRVIIANDLVEPR
GIAVAPELGWLFWSDWYDKRPKIERSNLDGNDRIILLKDDLGWPNGITLDIKARTLYFCD
AKTDRIEVVGMNGEDRKELVSENLPHVFGLTQLGDYLYWTDWQRRTIDRVNKNTGSDRKI
IIDQLPNLMGVKAINLKEPLNDNPCGDNNGNCSQFCFYKPKGYYICACEIDYELAMDGKT
CILSESFLIFARSEHIGILSTENSHYSDIIPIAGMKEASAVDVDIKNKRVYWTDIKLKTI
NRVYLNGSMAERIITFGLQSPEGLAVDWIGGNLYWCDSGTKRIEVSRLDGTMRKVLLWND
IKNPKNLLLNPKKGFMYWSELDGITGSIHKASMNGEGKHCLINKIGRVISITSDYDSGLI
YWTTLTPNSGSIESIDFNGRRQSKIVSIPFGGYLSAITYFRGSLYWLDWSNGTYFQVDIQ
SGTILKQTKINLDHVTDLITFDKASQTGTNPCAINNGGCQQLCLVKGSTRDHEPLSYHCS
CETHFTLFKNNTCSAPNSFLIVAQKTTFYRVVMDIDDSSDSSLPVIGLKHVKAVEYDPIS
HMIYWIDGRTQMIKRCHENGSNPSMFIGNNGNTYNLYDLALEPYNRLLFWTCTVTDTINV
TRLTNSSFQGSIFKSFDGEKPRNLAIHPEKGYIYWTDLGSQHRVIRSRIDGHNRVIIASD
LLSLEALTVDRVQNMVYFSYSSKVDVCDLHGYQRKTLISFDGALITNIAVLGPYLYWIDK
EKQVIERVNKSTGVVSEGSTVMNQNPHLVDIISIYIPTPEILASHPCSAMNKHGMCSHLC
IVTGVNESTSSNHQCSCPLGLIMSDRQCVNVPVCGPEQFICNSLSPECMPLIWRCDGQTD
CHDGSDEVNCSECSRQQFKCLDGRCIDKNWVCDGTKQCSDGSDESRCCESGLLSNDRYQC
ISNGACIPVKEVCDGWKHCIDGSDETYLACSLIRNVGHTTSPTSDKSFKDTLFFTIIFFV
TVFSLLLVIIYRCAKSDLDHSPSLTSNNIVTYTAIPIPRQYSSTSAYTAMQNGTHIDLIS
PSNCSPLNPPPSPTTTLTMQTNDYIRTNQYLRYDDRYEPPCPTLCSQTDLPTDIYDDSDF
AMPLEPCPPPPTPRSHSPSSSTYFSPNAPPPSPNSCKRLC
NT seq
4983 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgacgaggccggacgcgcaacagcgatccgtcggccgagttgctgatcagtcg
cctccaccacagcgaagacgatgcgcatcacgaccattgtcccgtcggacgaccgcccgt
cgtgaaccttgtgccgttgctgccgccgccgccgccgccgccgtcattaccgatcacaac
accggcacgaacgctaggagcacgatcgccactgttttaaccgagacgtcctggacacca
gtcaccaggaaatgcgccaggatgacgtcgccgtggatttttgtgatgctgtactgcacc
gcgatgatgtcgctcgtcaacgcttatccaaatttgatatacaccacatctaaggatatc
cgaatggctaatatgtcaaaaatgactagaattaatgttattgttaaagatctcatcgaa
ggaagtgcacttgatttctattataaaggatctttgatatgctgggctgatcatggtcaa
gaatctattcaatgtgtttcttacaacggaactcatgccactaacaaagtggcaatattg
aacactggtattattacaccagatggtttagcttgtgactggcttactaaaaaaatatat
tggactgacggagatactaatagaattgaagttgcatcattagatggaaaatatagaaaa
gtactttattgggaagacattgatcaaccacgtgctgtagctttagttcctatggatggt
ataatgttttggaccgattggggtgaagttccaaaaattgaacgtgcaggaatgaatgga
gatttatctacaagaaaagtcatagttagtgataatatattttggccaaatggcttaact
atagatttttataccaaacacatctactgggttgatgggaaacttggttttattgatata
atggattatgatggtagaaataggaagactattcttgaaaaaggaataccatatccatat
ggtattgctctatatcaagatagattatattggactgattggaagacatggtcgattcat
gtagtaaatcgtagtgggggtggtaatagccgtgaaattatacatagtaataatgtacca
atggatatccgtgtgtggaacccagcccgacagccggaaaaaattaccctctgtgataag
aataacggaggttgttcagatctgtgtcttctctctccaaattctcctggatattcatgt
gcttgttccacaggaataaagcttatagattatcataattgtgcagaaggtgtccaagaa
gtcttatttcttgtacaaaaaactgatatctgtcaaatatcattagattctccagatcat
actattatgtctatacctcttactggtttggctcatgcaattgccatagattacgaccct
gttgatgggtatatttattggactgacgatgaaataaaaatgattcaacgagcaaaaatg
aatggtagtaaccaaggagttgtcatttccaatgaaatatatcatccagatggagtagcc
attgactgggttgcaagaaacatatattggactgatactggaacagatagaattgaagtt
gcaagattaaatggaaaacacagaagagttataattgctaatgatttggttgaacctaga
ggtatagctgtagcacctgaattaggttggctattttggtctgattggtatgacaaaaga
cccaaaattgaacgttccaatttagatggaaatgatagaattattttacttaaagatgat
ttagggtggccaaatggaataacattggatattaaagcaagaactctttatttttgtgat
gcaaaaactgatagaatagaagttgttggtatgaatggggaagaccgtaaagaacttgtg
agtgaaaatttgccgcatgtatttggtttgacacaattgggtgactacctttattggact
gattggcaacgtcgtacaattgacagagtgaataaaaatactggatctgaccgtaaaatc
attatagatcaactaccaaatttaatgggtgtaaaagctataaatttaaaagaacctctt
aatgacaatccatgcggtgataataatggaaattgtagtcaattttgcttctataaacct
aaaggctactacatttgtgcatgtgaaatagattatgaattggccatggatggaaaaact
tgcatattgtctgaatcgtttctaatatttgctcgatctgaacatattggaatattaagt
actgaaaatagtcattattcagatattattcctatagctggaatgaaagaagccagtgct
gttgatgtcgacataaagaataaacgagtttattggactgacattaaattaaaaacaatt
aatagagtttacttaaatgggtcaatggcagaaagaattattacgtttggcctacaatct
ccagaaggattagccgttgattggattggtggtaacttatattggtgtgattcaggcact
aagcgaattgaagtatcaagattagatggaaccatgcgtaaagttttgctttggaatgat
attaaaaatccaaaaaatttattacttaatcctaaaaaaggatttatgtattggagtgaa
ttagatggcattactggctcaattcataaagcatcaatgaatggtgaagggaaacattgt
ttgataaataagattggtagagtcataagtattacttcagattatgatagtggtttgatt
tattggacaacgttgacaccaaatagtggatccatcgaaagcattgattttaatggaaga
cgtcaaagtaaaattgtgtctattccttttggtggttatctttctgccataacatatttc
aggggttctttatattggttggattggtcaaatggaacttatttccaagtcgatattcaa
agtggtacaattttaaagcagactaaaataaatttagatcatgttacggatttgataacc
tttgataaagcaagtcaaactggaacaaatccatgcgctataaataatgggggatgccaa
caattatgtctcgtaaaaggatcaacaagagatcatgaaccattatcatatcactgttca
tgtgaaacacatttcacattatttaaaaataacacttgctcagcaccaaatagtttcttg
attgtggcacagaaaacaacattttatagagtggtaatggatatagacgattcttcagat
tcttcactccccgtcataggattgaaacatgtaaaagcggttgaatatgatccaatatca
cacatgatttattggattgatggtagaacacaaatgataaaacgttgccacgaaaatggt
tcaaatccgagtatgtttattggaaacaatggaaatacatacaatttatatgatctcgct
ttggaaccatacaacagattgttgttttggacttgtacagtaacagatactataaacgtt
actcgtttaacaaatagcagcttccaaggttctatctttaaaagttttgatggagaaaaa
ccaagaaatttggcaatacatcccgagaaaggttatatttattggactgatttgggaagt
caacacagagtaataagatcccgtattgatggccataatagagttattatcgcctctgat
ttgttatctcttgaagcacttactgttgacagagtacaaaatatggtttatttttcctat
tcaagtaaagtagacgtttgtgatcttcatggttatcaaaggaaaacgttgatttcattt
gatggagcacttatcaccaatatagctgttcttggaccatatttgtattggatcgataaa
gaaaaacaggtgatagaaagagttaataaatccactggtgttgttagtgaaggcagcact
gtcatgaatcaaaatccacatttagtagacataatttcgatatacatccctacacctgag
attttagcatcgcatccatgtagtgcaatgaacaaacacggtatgtgttcacacttatgc
attgtcactggagtcaatgagagtacatccagcaaccatcaatgctcttgtcctctaggt
ctgataatgagtgaccgccaatgtgtgaatgtaccagtttgtggccccgaacaatttata
tgcaattctctaagtcctgaatgtatgcctttgatatggcgttgtgacggccaaacagac
tgtcatgatggttcggatgaagtcaattgttcagaatgtagtagacaacaattcaaatgt
ttagatggtcgttgtattgataaaaactgggtgtgtgatggtactaaacaatgttctgat
ggttcagatgaatctcggtgctgtgaatctggattgctttcaaatgatagatatcaatgc
atttctaatggagcatgtataccagttaaggaagtttgtgatggttggaaacattgtatc
gatggatctgatgaaacttatttggcttgctcgttgattagaaatgtgggacataccaca
agccccacaagtgacaaatcattcaaagacactttgtttttcacaataattttctttgta
acagtatttagtttgttgttggtcattatttatcgttgtgctaaaagtgatctagatcat
agtccaagtctcactagtaataatatagtcacgtacactgctataccaattcccagacaa
tattcttcaacatctgcttatacggcaatgcaaaatggaacgcatattgatttgatctca
ccatcaaactgcagccccctgaatccaccaccgagtcctacaaccacgcttacaatgcaa
acaaatgattacatcagaacaaatcaatacctgcgatatgatgatcgttacgaacctcct
tgccccacattgtgttcacaaactgacttgcccaccgatatttatgatgattctgatttt
gcaatgcctctcgaaccttgtcccccaccccctactcctcgatcccattcgccatcatca
agcacttattttagcccaaatgcaccaccgccatcacctaatagctgtaaaaggctttgt
tga
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