Rhopalosiphum maidis (corn leaf aphid): 113559885
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Entry
113559885 CDS
T06065
Name
(RefSeq) dynein intermediate chain 1, axonemal-like
KO
K10409
dynein axonemal intermediate chain 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
113559885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rmd03037
]
113559885
04812 Cytoskeleton proteins [BR:
rmd04812
]
113559885
Cilium and associated proteins [BR:
rmd03037
]
Motile cilia and associated proteins
Dynein arm
113559885
Cytoskeleton proteins [BR:
rmd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
113559885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_LRRK2
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
113559885
NCBI-ProteinID:
XP_026821468
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Position
3:2281313..2287414
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AA seq
626 aa
AA seq
DB search
MQIENELCRKAENLALEENETVGENTIEEVEEEQYINPLVLNENDDELQSVEDVNEEFMD
ENMEMGEEGEEEDLSIDLKDEPEEEKESHKVKKKVSEESFLSLPVTKYCSVVKLKNKFNF
FDRVSQTKKILMRNKETQTPITKKFEFAAFVSLSDIYDTYEVDYAIQKEEKDKELREKLA
AHMGKKKIKPRKKMRIENDEIKHELLKVSKIVEKIISLNDTDAIAQDFRYYEDPSDQFRN
RGEGTLMLMWTMVYEKEKKLIVTDIAWSPDYFDMFGITLSIPQSDLPFTDNPDIGNVCLW
ALKNPSYPDYVAHTQSGAMCLSFHQDYGNILAVGLRDGNVAVYNVSLLKNEPEYSTNLTR
TKLMASVMQVVWCKNLPTGELNFFSVSEDGMVCQWLLLQNELNKIIKMSLVIDMYPEIEL
GGIKQPYYARGTTITFNPANPQLYLVGTVEGYIFKCSTGWTNYVQRFKAHEMPVNRIDFN
KFDSNIYLTCSEDFVVKLWEDKSEAPLIIFDLQTGLTDLRWSPFSGSVFGITTVDCRVIF
YDLDISTKKSVCDQLIHPTEQYRLVRLAFDKRVPMIVVGSSMCTIATYKLSPNLRTIMKS
PKKGVQIPTETLEFEKLHAVLNTIRE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattgaaaatgaactatgtagaaaagcggaaaatttagccttagaagaaaatgaa
acagtaggtgaaaatacgatagaagaagtagaagaagaacaatatattaatccgttagtg
ttaaacgaaaatgatgatgaattacagtcagttgaagacgttaatgaagagttcatggat
gaaaatatggaaatgggagaagaaggtgaagaagaggacttatcgatagatcttaaagat
gaacctgaagaagaaaaagaatcacataaagtaaaaaaaaaagtatccgaagagtccttt
ttaagtttgccagtgacaaaatattgtagtgtggtgaaacttaaaaacaaattcaatttt
tttgacagagtttcacaaactaaaaaaattcttatgaggaataaagaaactcaaacccct
ataaccaaaaaatttgagtttgctgcgtttgtatcattatctgatatttatgatacttac
gaagtcgattatgcgatacaaaaggaagaaaaagacaaagaactaagagagaaattggcc
gcacatatgggaaagaaaaaaattaaacctcgtaaaaaaatgcgcattgaaaacgatgaa
attaaacatgaattgttgaaggtatctaagattgttgaaaaaatcataagtttaaatgat
acggatgcaatagcacaagattttcgatattatgaggatccgtcagatcaattcaggaac
agaggagaagggactttaatgttaatgtggaccatggtatatgaaaaagaaaaaaaatta
attgttactgatatagcctggagtcctgattattttgatatgtttggtataacgctcagc
attccacagagtgacttaccatttaccgacaatccagacattggtaacgtatgcttgtgg
gctttaaagaatccgtcgtacccagattatgtggctcatacacaatccggagccatgtgt
ttgagttttcatcaagattatggtaacatccttgccgttggtttgcgtgacggcaatgtg
gccgtatacaacgtgagcttactgaaaaacgaaccagaatactcgacaaacttaacgcgt
accaaactcatggctagcgtaatgcaggtagtctggtgtaagaatttacctaccggcgag
ttaaacttcttctctgtatccgaggatggtatggtctgccaatggttattgttgcaaaat
gaattgaataaaatcattaaaatgtctttagtcatagatatgtatccagaaatcgagctt
ggtggtatcaaacaaccttattatgccaggggcacgacgattacgtttaatcccgcaaat
ccccaattatacttagttggaacggttgaaggttatatatttaaatgtagtacgggatgg
actaattatgttcagagatttaaagctcacgaaatgccggtaaaccgaatcgatttcaac
aaatttgattcaaatatataccttacgtgtagtgaagactttgtagttaaattgtgggaa
gacaaatccgaagctccgttgataatctttgatctacaaacgggtttgacagacttgcgt
tggtcaccgttctctggttcagtatttggtattactactgtggactgtcgtgtcattttt
tacgatttggacataagcactaaaaaatccgtttgtgatcagctcattcatcccacagaa
caatatcggctggttcgattagcttttgacaaacgagtacctatgattgtggttggaagt
tcaatgtgtactattgctacgtataaattgtcaccaaaccttcgtacaattatgaaatct
ccaaagaaaggagttcaaattcctacagaaacattggagtttgaaaaattacatgcagtg
ttgaatactatcagagaataa
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