Rhopalosiphum maidis (corn leaf aphid): 113559928
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Entry
113559928 CDS
T06065
Name
(RefSeq) deformed epidermal autoregulatory factor 1 homolog
KO
K23041
deformed epidermal autoregulatory factor 1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rmd03000
]
113559928
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113559928
Transcription factors [BR:
rmd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
113559928
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113559928
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAND
zf-MYND
TFIIA
V_ATPase_I_N
Cdc13_OB2
Motif
Other DBs
NCBI-GeneID:
113559928
NCBI-ProteinID:
XP_026821516
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Position
4:1199617..1203747
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AA seq
559 aa
AA seq
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MSVIDGGGYTDDQQHQQQLQQQQQQQRQHQQQQHRRHQQHHHHHQQHQQQQQQQRLQAVV
VTTADERGGGGGRQRHSENVAEQTDMAETGTRATDVVVVTTADAVKENRNGPPPPSSSSS
DVSVSAATYATAAAEHVASSQVQVSSIPVGQLINVSAAGTFNVITADSLQLSESNDFKPL
LCVDNSCLNCDTRTQVDGDTWRTVVRAEDGTFKTAHIVLRPDNSTTNNVHEEETDQGVSS
PNTAPCYSYTEAARLPVLPVRCKTTNAELHKKKFGSGCRGKCIKFGNQWYTPSEFEALCG
RASSKDWKRSIRFGGRSLQTLIYDGVLLPHAMSCTCAACCDDESATGPVRLFTPYKRIRT
KKHSSSHSKKKKIEDGAAISNDEDSCDSSVGISLDNGDMDIKDEEPILIQTGDISQAEIV
QSNDSIEDMFKKLENMSSRMIKMVHHFRNSMRVAKYKWSTEKQELLAELKRAKENSIENR
NDFDVETISSVAAGLQPSTDDIPDVKKCANCNRDAFAECSLCRRTPYCSTFCQSKDWNNH
QVECDNSQGSIMLIVQTQE
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgatcgacggtggtggttatacagacgaccaacagcatcagcaacaacttcag
cagcagcagcagcaacagcgacaacatcaacaacaacagcatcgtcgacatcaacaacac
caccaccaccatcaacaacatcaacaacaacaacaacaacaacgactgcaagcagtggtg
gttacgacggcggacgaacgtggcggcggtggtggccggcagcgtcattcggaaaatgtc
gccgagcagacggacatggccgagaccggtacgagggccaccgacgtcgtagtcgtcacc
accgccgacgcggtgaaagaaaaccgcaacggaccgccgccgccgtcgtcgtcgtcgtcg
gacgtctccgtgtcggccgctacgtacgccacggccgcagccgaacacgtcgcctcgtct
caagtacaagtgtcctccatacccgtcggacagctcattaatgtgtcggccgctggcacg
ttcaacgttattaccgctgactctttgcagctttcggaatcgaatgatttcaaacctctt
ttgtgtgtagataacagttgtttaaattgtgatacacgcactcaggttgatggtgatacc
tggcgaacagtagttcgagctgaagatggcactttcaaaactgctcatattgtacttaga
ccagacaactcgaccactaataatgttcacgaagaagaaactgatcaaggagtatcatct
cctaatactgcaccttgctattcatatactgaagctgctaggttgccagtattaccagtc
cgatgtaaaaccactaatgcagaactgcataagaaaaaatttggttctggctgccgagga
aagtgtattaagtttggaaaccaatggtacacacctagtgagtttgaagccctttgtggc
agggcttctagcaaagactggaaaagaagtatacgatttggcggccgtagtctgcaaaca
ttaatatatgatggagttttactaccacacgctatgagttgtacatgtgcagcttgttgt
gatgacgaatctgctactggccctgtacgactattcacaccttacaaaagaatacgtaca
aaaaaacattcatctagtcattcaaaaaagaaaaagattgaagatggtgccgctattagt
aatgatgaagatagttgtgatagcagtgtaggtatatcattagacaatggcgatatggat
attaaagatgaagagcccatacttatacagacaggcgatatttctcaagctgaaattgta
caatcaaatgattcaattgaagatatgtttaaaaagttagaaaatatgtcttcgagaatg
attaaaatggttcaccattttcgtaactctatgcgtgttgccaagtacaaatggagtacg
gaaaaacaggagttgttagcagaacttaagagagctaaagaaaattctatagaaaataga
aatgattttgatgtggagacaatttcaagtgtggcagcaggattacagcctagtactgat
gatataccggatgttaaaaagtgcgccaattgcaatagagatgcatttgctgagtgttca
ttgtgtcgacgtacaccatattgctctacattttgtcaaagtaaagactggaacaatcat
caagtggagtgtgataattcacaggggagcattatgctcattgtacaaactcaagaatga
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