Rhopalosiphum maidis (corn leaf aphid): 113559982
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Entry
113559982 CDS
T06065
Name
(RefSeq) piwi-like protein Siwi
KO
K02156
aubergine
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
113559982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rmd03036
]
113559982
Chromosome and associated proteins [BR:
rmd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
113559982
piRNA pathway
113559982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
DUF4280
DUF4641
Motif
Other DBs
NCBI-GeneID:
113559982
NCBI-ProteinID:
XP_026821575
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Position
3:complement(8218978..8232967)
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AA seq
762 aa
AA seq
DB search
MRSAGTIGTPVELVVNCIKLFFNPDWKLQKYRVHFNPNIQTNIQNEILNKHKSILREFVF
YGYHLYTSVKYVLEKFILYDYGGPDGSLVMITINHIGEIQESDLIRVPILMKFLLNCFCH
SNYTRVESRYYNPEAIVTNTRLGIKYLPGYEFGLSEVEGQLLLRIGLTNKIETTETVLDF
LRVSCGNSRNRVPSLINNFKASIIGTVVLTSHNNKLYKIRGVNENLNIYSTFITEDGSKI
SYMDYYKQKWNITIIDAKQPMLKTTKHDENGSLKTVYLVPELCILTKLTKIIGNKTLVKE
LNQYTNYGPSKTMIKYKQFFSKLHSKTKFIDTLKTWNLHLGEHFIKISGRVLPSFFLKSL
AEMYPIGPLGNWTKEIQFLGMIVIPKVESWVILTPSKYFLKVKKFIGLLRLAADMILIHL
PIPEIIQMNDACQRTYMNHLDDIIKNNVHTLILCVVKSLHSDLSNKINRKLCIGAAVPSQ
LISLKQVITNDNSKCFKTAIRINCKLGGVPWLLQFPKQNFMAVGLDIYQDLHDKHKYYCA
VMASMDDSYTRYFSFLELLHKIYISEFFVTTIAKAIYKFKDKNGTFPTGIIIYRDGLEFD
TINNMNSICVSEIISLMKQRDEFFGGGVNYIIPFVYITIQKNYITKLFSQYGPTNYRNPP
IGTIVDTSITDEIMYDFLLISHTTKSGIVQPTYYRIVYNCFPHLTIDEIQMFTFMLTHMY
FNCSHTIRVPAPCRMAYKLAYFSANTLKSTQNILLHGFPFFF
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcgttctgcgggaactattggaacaccagtagagttagtagtaaattgtatcaaatta
tttttcaatccagattggaagttgcaaaaatacagagtacatttcaatccaaatatccag
acaaatattcaaaacgaaatattaaataaacataaatccatcttgagagaatttgttttt
tatggatatcatttgtacacctctgtaaaatatgtactagaaaaatttattctgtatgat
tacggtggtcctgatggttcattagtaatgatcactataaatcatattggtgaaattcaa
gaaagtgatttgataagagtaccaattttaatgaaatttttacttaattgtttttgtcat
tcaaattatacgagagttgaatccagatactataatccagaagctatagtaactaataca
agacttgggataaaatatttgcctggttacgaatttggacttagcgaagttgaaggtcaa
cttctattacgtatcggactaacaaataagattgagactacagaaactgttttagatttc
ttacgagtgagttgtggaaatagcagaaatagagtccctagtttaataaacaattttaaa
gctagtataattggtactgtagttctgacatcacataataataaactgtacaaaatccgt
ggtgtcaatgagaatttaaatatttattctacatttattactgaagatggatcaaagata
tcatacatggattattataaacaaaaatggaacataactatcatagatgccaaacaacca
atgttaaaaactacaaaacatgatgaaaatggttcactaaaaacagtataccttgttcca
gagttatgtattctaactaaacttactaagattataggaaataagacactcgttaaagaa
ttgaatcagtatacaaattatggaccaagtaaaacaatgatcaagtataaacaatttttt
agtaaattgcattctaaaacaaagttcatagatacattaaaaacatggaacttacatttg
ggcgaacactttatcaaaatctctggacgtgtactcccttctttctttttgaaaagtctt
gcagaaatgtaccctattggacccctaggaaattggactaaagaaatacagttcttagga
atgatagttattccaaaagttgaaagctgggttattttaactcccagtaaatatttttta
aaagtaaaaaaatttattgggcttctaagattggcagcggatatgatactaattcatcta
ccaataccagaaataatacaaatgaatgacgcatgccaaagaacatacatgaatcatttg
gatgacattataaagaataatgtacatacacttattttatgtgttgtcaagtcactgcat
agtgatcttagcaataaaataaatagaaagttgtgtatcggagcagcagtaccatcacaa
ttaatatctttgaaacaagttataaccaacgacaattcaaagtgtttcaaaaccgccata
cgaataaattgtaagctgggtggagtaccctggttgctgcaattccctaagcagaacttt
atggcagttggtttggatatctaccaagatttacatgataaacataaatattattgtgca
gtaatggcttcaatggatgattcttatacgagatacttcagttttctggaattactacat
aaaatctatatttcagaattttttgtaacaactattgctaaagctatatacaagttcaaa
gacaaaaatggaacatttcctacagggataattatatatagagatggtttagaatttgat
acaataaataatatgaattctatttgtgtttctgagattatatcattaatgaaacaacgt
gatgagttctttggtggaggagtaaattatattattccctttgtatatattacaatacaa
aaaaattatataactaaattgttcagtcaatatggtcctacaaattatcgaaatcctcca
attgggacaattgttgatactagcatcactgacgagattatgtatgacttcctcttaatt
tcacatacaacaaaatctgggatagtacaaccaacttactatcgtatagtttataattgt
tttcctcatctaacaatcgatgaaatacaaatgtttactttcatgttaactcatatgtac
ttcaattgttctcataccatacgagtacctgctccatgtcgaatggcgtacaagttggca
tattttagtgcaaatacactcaagagtactcaaaacatattgttacatggattcccattc
tttttttaa
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