Rhopalosiphum maidis (corn leaf aphid): 113560176
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Entry
113560176 CDS
T06065
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113560176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmd03021
]
113560176
Enzymes [BR:
rmd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113560176
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113560176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
113560176
NCBI-ProteinID:
XP_026821735
LinkDB
All DBs
Position
1:68151053..68158885
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AA seq
1121 aa
AA seq
DB search
MYEPTLKNLTNVNYGKPPDSQNQILQELGTPHIDSFNYMIEEGLNLAISDLLPVEFDTKG
KYRVKLTLLDATIHQPRVPSGSLGVKSHNIYPLECRQRHGTYSGRLEIKLRWSINDAEQM
IIDRDIGQVPIMLKSKLCHLEKMSPKQLVNLGEHQDEWGGYFIVKGKERLVRLLLGTRRN
FPTAVQRNTWKNKDQYFSDIGILIRCVKDDLTTVTNNLHYLTNGTAKLMIPIKKRVFYAP
IILIMKCLTNSSDEFIFRHIIKGHEDDLYFIRSVMEMMRSLHESNIHCQEDAKEYVGILF
RPRFYELPEWKTNKEVCDHMLRNYVLIHLNTDFDKFKLLVFMLQKLFSVAQNKCLIEGAD
GIMMQELMLGGHLYLKILKEKLQLWLNLVKINLLKIDQGGQPSIGDMMTALRRCDLIEHS
LTNFFATGNLNSQSGLGMQQDKGLTILVENISRMRYMAHFRAVHRGAIFESMRTTEPRRL
LPDAWGFICPVHTPDGTPCGLLNHLTKSCIVTKSVSRKVLRDIPKVLISLGMCEASYKPQ
DVNIGFVYNVILDGRIVGYVPETLTALFIKKLRTLKVKGKQIPETTEIVWLQKKEENILG
QFPGLFLFTGNARMMRPVFNLDLEQIELIGTFEQVYLDISISEDEIRPNITSYREVTKTD
FLSHLACLIPLPDYNQSPRNMYQCQMGKQTMGTACHNWHLQSETKLYRIQTPASPLFRPV
HYDALSMDDFAMGTNAIIAVISYTGYDMEDAMIINKMALDRGFAHGSIFKTELIETKPHT
YFMRDPFKEDLSNYLGLDGLPHIGLKLSKGTPYYSYFDEQIQGFIIAKYLSNEEVIVDSV
RQCGDFTTGRKIPNKATITVRVQRNPTVGDKFASRAGQKGXFSKGWPSEDLPFTESGMVP
DIVFNPHGFPSRMTIAMMIECMAGKSAAVHGVVHDATPFKYSEEDTAIDFFGKLLEAGGY
NYFGTEQMYSGVDGRAMKASIFFGVVHYQRLRHMVSDKWQVRSTGPVDAVTKQPVKGRKR
GGGGRVGEMERDALISHGTPFLMQDRFMDCSDKSTALLCLKCHTILSSLIHFKEDSYSSK
MTKCRTCDSTQVQEIGIPNVFRYLCSELAAINIKLQLNIEV
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaccaacacttaaaaatttaacaaatgttaactatggtaaacctcccgattcc
caaaatcaaattcttcaagaattgggtactccacacattgactcctttaattatatgatt
gaagaaggattgaatttggccatctctgatttgctaccagttgaatttgatacaaaagga
aagtatcgtgtaaaactcaccttactggatgcaactattcatcaaccgcgagtaccttcg
ggatcacttggtgttaaatcacataatatatatccattagaatgtcgacaacgccatggt
acttattcaggaagattagaaataaaactcaggtggagcattaatgatgctgaacaaatg
ataattgacagagatatcggccaagtgccaataatgttaaagtctaaactatgtcatttg
gaaaaaatgtctccaaaacaattagttaatctaggagaacatcaagatgaatggggtgga
tattttatagttaaaggcaaagaacgtctagttcggcttttactgggaacaaggaggaat
tttccaactgctgttcaaagaaatacatggaaaaacaaagatcaatatttttcagatatt
ggtattttgataagatgtgttaaagatgatttaacaactgttacaaataatttacattat
ttgacaaatggtactgcaaaattaatgatcccaattaagaagagagtattttatgcaccc
ataattttaataatgaagtgtctaactaacagttctgatgaatttatatttagacacatt
attaaaggacatgaagatgatttgtatttcatcagatctgtaatggaaatgatgcgttcc
ttgcatgaaagtaacatacattgtcaagaagatgctaaggaatatgttggtatcctgttc
agacctagattttatgaattacccgaatggaaaactaacaaagaagtttgcgatcatatg
ctcaggaattatgttttgatccatttgaatactgattttgataaattcaaacttttagtt
tttatgttgcaaaagttattttcagtggcacaaaataaatgtttaattgaaggtgctgat
ggaatcatgatgcaggaattaatgcttggtggtcatctttatctaaaaattctcaaagaa
aagttgcaattgtggttgaatttggtcaaaatcaacttgcttaaaattgaccaaggtggt
caaccatctattggtgatatgatgactgcattaagaagatgtgatttaattgagcactca
ttgacaaatttttttgctactggtaatctcaatagtcaatctggcttaggaatgcagcaa
gataaaggacttacaattttggttgaaaacataagtcgaatgcgttatatggctcatttc
cgcgcagtccatcgtggtgctatttttgagtctatgagaacaactgaacctcgaaggttg
ctaccagatgcttggggttttatatgtccagttcatactcctgatggaactccttgtgga
cttcttaatcatttaacaaaatcatgtatagtcactaaatcagttagtagaaaagtactg
cgtgacattccaaaggtattaatatcccttggtatgtgtgaagcatcatacaaacctcag
gatgtcaatattggatttgtatataatgtaattcttgatggtcgcatagttggatatgta
cctgaaacattgacagcactttttatcaaaaagctccgtaccttgaaagtgaaaggaaaa
caaataccagagactactgaaattgtatggcttcaaaagaaagaagaaaatattttgggt
caatttccaggtctttttttgtttactggaaatgcaagaatgatgagacccgtttttaat
ttagacttagaacaaatagagctgataggaacttttgaacaagtttacttagatataagt
atttcagaagatgaaatcagacctaatataacatcatatagagaagttacaaaaacagat
tttcttagtcatttagcatgtttaattcctttaccggactacaaccaaagtcctcgtaat
atgtatcagtgtcaaatggggaaacaaacaatgggaactgcttgtcataattggcattta
cagtcagaaacaaaattgtataggatacaaacaccagcatcaccattgttcagacctgtt
cattatgatgcgttatcaatggatgattttgcaatgggtacaaatgctattatagctgta
atttcatacacgggttatgatatggaagatgctatgattataaataaaatggcattggat
cgaggttttgctcatggttctatatttaaaacagaattaattgaaaccaaaccacatact
tatttcatgcgtgatccatttaaagaagatctttctaattatttgggcttagatggtctt
ccacatatcggtttaaaactatctaaaggaacaccatattatagttattttgatgaacaa
attcaaggatttataatagctaagtatttaagtaatgaagaagttattgttgattcagtt
cgtcaatgtggggattttacaactggccgaaaaatacctaataaagctacaatcactgtg
agagttcaaagaaatccaacagttggagataaatttgctagtcgtgcgggacaaaaggga
ntatttagtaaaggctggccttccgaggacttgccatttacagaaagtggaatggttcct
gatattgttttcaatcctcatggttttccttcaagaatgactatcgccatgatgatagaa
tgtatggcaggaaaatctgcagcagtgcatggtgtagtgcatgatgctacaccttttaag
tatagtgaagaagatactgcaattgatttttttggaaaactcttagaagcaggtggatac
aattattttggaacagaacaaatgtatagtggtgtagatggccgagcaatgaaggcatct
atattttttggtgttgtacattatcagcgattgaggcatatggtgtcagataagtggcag
gtacgaagtactggcccagttgatgctgttacaaagcaacctgttaaaggccgtaaaaga
ggtggtggtggtcgtgttggtgaaatggaaagagatgcactaatatcacatggaactcca
tttttaatgcaagatcgattcatggattgttcagataaatcaacggctctgttatgtttg
aaatgccatacaatactatcttcattaattcactttaaagaagatagttattcaagtaaa
atgacaaaatgtagaacatgcgactctactcaagtacaagaaattggaatacctaatgtg
tttcgatatttgtgctctgaacttgcagcaataaatattaaattacagttaaatattgaa
gtataa
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integrated database retrieval system
