KEGG   Rhopalosiphum maidis (corn leaf aphid): 113560411
Entry
113560411         CDS       T06065                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113560411
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rmd03041]
    113560411
Spliceosome [BR:rmd03041]
 Complex B
  Other components
   Prp19-related factors
    113560411
 Complex C
    113560411
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 zf-CCCH_2 RRM_occluded zf-CCCH_4 zf-CCCH RRM_3 RRM_YTH1 Nup35_RRM_2 zf-CCCH_10 zf-CCCH_PARP12 zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 113560411
NCBI-ProteinID: XP_026822071
LinkDB
Position
4:complement(11387339..11390463)
AA seq 381 aa
MSLSKTTNTYNRQNWEDSDFPIVCETCLGDSPYLRMAKEKYGKECEVCARPFTVFRWCPG
ARMRFKKTEICQTCARLRNACQTCLLDLEYGLPLQVRDAALKIKEQIPKSDVNKEYFVQN
MDSELAKMDEAGGKCQNASDVLAKMARKAPYYERNRPHICSFWVKGECRRGEECPYRHER
PTDPEDPLSNQNFKDRYYGVNDPVAEKMMNRASEMPKLEKPEDQTITTLYVGNLNDITTE
KDLRDVFYQYGEIRNITHVAHQNCAFIQYTTRAAAEVAAESTYGRLTLGGHKLNVRWGHA
QARKDKETTSIAAMKETKMKPSPGLPAPLPPLPTELQNNFFNIAPQTVPVVATPFIPVMP
TLPHPSMPYMSTPLYPPGTSK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcgctgtcgaaaacaacaaacacttataatcgacagaattgggaagactccgacttt
ccaattgtttgtgaaacatgcttaggagatagcccttacttgcgaatggcaaaagaaaaa
tatggcaaggagtgtgaagtttgtgcaagaccatttacagtattccgttggtgcccaggt
gctagaatgcgtttcaagaaaactgaaatatgtcaaacatgtgcacgtctaagaaatgct
tgccagacatgtttattggatcttgaatatggacttcctttacaagttcgagatgctgca
ttaaaaattaaagaacaaattcccaagtctgatgttaacaaagaatattttgttcaaaac
atggattctgaattagccaagatggatgaagctggtggaaaatgtcagaatgctagtgat
gtattggctaaaatggctcgtaaagctccttattatgaacgtaacagaccacacatttgt
tcattttgggtgaaaggtgaatgtcgacgaggagaagaatgtccataccgtcatgaaaga
cctacagacccagaagatccattatcgaatcagaatttcaaagacagatattatggtgta
aatgatccagttgccgaaaaaatgatgaacagagccagtgaaatgccaaaactagagaaa
ccagaggatcaaacaatcacaacactttatgttggtaacctgaatgacataactacagaa
aaagatttgagggatgtattttatcaatacggagaaattcgaaatattactcatgtagct
catcagaattgcgcattcattcaatataccacacgagctgcagctgaagtggcagctgag
agcacttatggccgtttaacattaggtggacataaattgaatgttcgttggggtcatgct
caagcacgtaaagataaagaaaccactagtatagcagctatgaaagaaaccaaaatgaaa
ccttcaccaggattacctgctccattacccccactgcccactgagttacaaaacaatttt
ttcaacattgctcctcaaactgtgcctgttgttgctactcctttcatacctgtcatgcca
acattacctcacccaagtatgccgtatatgtcaacacctctttatccacctggtacaagc
aaatga

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