Rhopalosiphum maidis (corn leaf aphid): 113560624
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Entry
113560624 CDS
T06065
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
113560624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113560624
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
113560624
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
113560624
NCBI-ProteinID:
XP_026822414
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Position
4:3349315..3352786
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AA seq
850 aa
AA seq
DB search
MMLRRSKRTCKPKETVENNSREPPIKRKRGHRLEVSVIDSSTDDNSSDDELVETHNTFMK
NSCTLNLSESDSDNDSQDFNKPNVKALEQSDTESEVDDNVCQTNFDFTTLSNPQDTIELS
KSDEKSKTVDTLVDNSLYDNMDVAKILSVGEGVNLGTVLNDVDDTVTKEMKRNDDYTIPE
MVEITVKLPNDMKCKKGQDMENILRRRMNTICKDTQVLIHKVNLLLWISYGNHLNNVLNS
PEVMGSALSLVPSKKAYPPKQCDLNYLENYIKWFSKTIKLTSKTDPLCEINVLSLIDRFS
KCEAKTRYELIAMFISILRSLGLNVRLVINLNVVSIKPSSEQLLGPLVEDDHMKPSTSKS
NVDNKKKTSSKSEYFNKKSNKLKNSKKEIKNNEIDNGKKKSKVNKIMYQNSSSSDQEDDI
FVKSKTNAKSEYFNKVSNKARSSLEKDESKKLKSVDQKKVSKKKSKISEKIDRRVLSTDE
DDHSIQDSETVVKKKVKNDFWVEVFLEMEEKWFCVDVIGQRIHCIKEIYNGTSHPMRYVL
AWYNDNSIKDITKRYDPYFHTLTRKIRVDPKWWKTTLRPYSPTGSAREREEDEELDKQLE
DIPLPKTVSEYKNHPLYALSRHLLKFQAIYPPEPPIVGHVRNEPVYLREYVHELNGRENW
LKEARVVKMGEKSYKQVKARPRFDRNGVRTDPPPLELFGYWQTEPYDPPTATNGQVPRNC
YGNVDLFKPCMLPKGTVHLQLPGLLRIAKKLNIDCAPAVVGFDFHAGGSHPVNDGFVVCQ
EYKDTLIDAWNQEIEESRKREQKRYEDRVYGNWKRLVRALLIRERLKIKYNYFGGDKEGQ
STSKTTDGRK
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgcgcagatcaaaacgtacctgtaaaccaaaagaaactgttgaaaataattct
cgtgaacctccaatcaaacgtaaacgtggtcatcgactagaagtttctgttattgattca
tcaactgatgataacagttctgatgatgaattggttgaaactcacaatactttcatgaaa
aattcttgtactttaaatttatcagaatcagatagcgataatgatagtcaagactttaac
aagcccaatgtaaaagcattagaacagtctgatactgaaagtgaagttgatgacaatgtt
tgtcaaacaaattttgatttcactactctttcaaatcctcaagataccatagaactttct
aaaagtgatgaaaaatctaagactgttgacacattggtggacaatagtctttatgataat
atggatgttgccaaaatattatctgtaggagaaggagttaatttaggaactgtgttaaac
gatgttgatgatactgtaacaaaagaaatgaaacgtaatgatgactatactattcctgaa
atggttgaaatcactgttaaacttccaaatgatatgaagtgtaaaaaaggtcaagatatg
gaaaatattctcaggagacgtatgaatacaatatgtaaggatactcaagttttaattcat
aaagtaaatttacttttatggatctcttatggtaatcatttgaacaatgttcttaattca
ccagaagttatgggttcagcattatctctagtaccttctaaaaaagcatatccaccaaag
cagtgtgatttaaattatttagaaaattatataaaatggttttctaaaacaataaaatta
acttcaaaaactgatccattatgtgaaataaatgtattatctttaattgaccgattttca
aaatgtgaagctaaaacaagatatgaactgattgcaatgtttatttctattttaagatca
ttaggattgaatgtacggttagtgattaatttaaatgttgtctcaatcaaaccaagttct
gaacaattgttgggtcctttagttgaggatgatcatatgaaaccatcaactagtaaatca
aatgtagataataaaaagaaaacttcatcaaaatcagaatatttcaataaaaaatcaaat
aaacttaaaaattctaaaaaagaaattaaaaataatgaaatagataatgggaaaaaaaaa
tccaaagtaaataaaattatgtatcaaaatagttcttcaagtgatcaagaagatgatatt
tttgtaaaaagcaaaacaaatgctaaatctgagtattttaataaagtatcaaacaaagca
cgatctagtttagaaaaagatgaatcaaaaaaattaaaatcggttgaccaaaaaaaagta
tcaaaaaaaaaatctaaaataagtgaaaaaattgatcgccgtgttctttcaactgatgaa
gatgatcattcaatacaggatagtgaaacagttgttaaaaaaaaagtgaaaaatgatttt
tgggtggaagtattcctagaaatggaagaaaaatggttttgtgtggatgttattggtcag
cgtattcattgtatcaaagaaatatataatggtacatctcatcctatgcgttatgttttg
gcttggtataatgacaatagtatcaaagatattacaaaacgatatgatccatattttcat
actctaacacgaaaaatccgcgtggatcctaaatggtggaaaactactttacgaccttac
agtcctaccgggtcagcaagagaacgtgaggaggatgaagaactagataaacaattagaa
gatataccattacctaaaacagtttcagagtataaaaatcatccattgtatgccttatca
agacatttgctaaaatttcaagccatttatccgccagaaccaccaattgttggacatgtt
agaaatgaaccagtttatctacgagaatatgttcacgagcttaatggtagagaaaattgg
ctaaaagaagctcgtgtagttaaaatgggagaaaaatcatataaacaagttaaagctcgc
cctaggtttgatcggaatggtgtacgaacagatcctccaccattagaattatttggttat
tggcaaactgaaccatacgatcctccaactgctactaatggtcaagttcctagaaattgt
tatggcaatgttgatttgtttaaaccttgcatgttacccaaaggaactgttcatcttcaa
cttcctggattactgcgtatagcaaaaaaattgaacattgattgtgctcctgcagttgta
ggttttgactttcacgcaggtggatcccatccagtaaatgacggttttgtagtatgtcaa
gaatataaggatactttaatagatgcatggaaccaagaaattgaggaaagtcgtaagcga
gagcaaaaaagatatgaagatagagtttatggtaattggaaacgattagtaagagctctc
cttattcgtgaacgtttgaaaatcaagtataattactttggaggcgataaagaaggtcag
tctacatctaagacaaccgatggcagaaaataa
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