Rhopalosiphum maidis (corn leaf aphid): 113560652
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Entry
113560652 CDS
T06065
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03022
Basal transcription factors
rmd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113560652
09124 Replication and repair
03420 Nucleotide excision repair
113560652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rmd03021
]
113560652
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113560652
Transcription machinery [BR:
rmd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113560652
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113560652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-RING_5
zf-RING_2
zf-RING_6
zf-C3HC4_2
AAA_23
zf-RING_UBOX
zf-UDP
zf-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
113560652
NCBI-ProteinID:
XP_026822459
LinkDB
All DBs
Position
1:9984407..9988249
Genome browser
AA seq
313 aa
AA seq
DB search
MEELACVRCMSSKFRNPNLVFSFNVCGHTMCANCIEVAFMKGSGPCPKCLIPLRRNGFKL
QQFEDASVDVEVETRKKILQDYNKTEDDFESLDEYNEYLIEIEDIIYNLVRNINVNETKE
RIDQYKRENKEIIMRNRMKLKREEQALDELIEEEKMHSQYKRDEVLRDEAEQRNKKLRVD
SELIDSLARSNSDARDIVNTYTHKKEEIPVPKPKSVSKPPINFTKFSTGVKFNQSSMPIS
IKEGPLFKYEPISHQLNGPTCPEITQLDSLGYMKYIRRESSQELAGGFLIKTSCLHYVQE
CVSALYERKTGKV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcgcgtgtgtccggtgcatgagctccaagttccggaaccctaacctcgtg
ttcagcttcaacgtgtgcgggcataccatgtgcgcaaattgcatcgaagtggcgtttatg
aaaggttctggtccctgcccaaaatgtctcattcctctacggcgtaatggttttaaactt
cagcagtttgaagatgcttcagttgatgttgaagtagaaacgcgaaaaaaaatattgcaa
gattacaacaaaactgaagacgattttgaatctttagatgaatataatgaatatttaata
gaaattgaagatattatttataatttagttaggaatattaatgtaaatgaaacaaaagaa
cgtattgatcaatacaaaagagaaaataaagaaataattatgaggaacagaatgaaatta
aaacgtgaagaacaagccttagacgaattaattgaagaagaaaagatgcattctcagtat
aaaagagacgaagttttaagagatgaagctgagcaaagaaataaaaaacttcgagtagat
tctgaattaattgatagtttagcacgttctaattctgatgctagagacattgttaacaca
tatacgcataaaaaggaagagattcctgtcccaaaaccaaaatctgtttctaaaccacct
ataaacttcacaaagttttcaaccggtgtcaaattcaatcagtcttctatgccaatttca
ataaaagaaggtccattattcaaatatgagccaatctctcatcaacttaatggccctacc
tgtccagaaattactcaattagattcattagggtatatgaaatacattaggagagaaagt
tctcaagaacttgcaggtggatttttaataaaaacatcctgcttgcattatgtacaggaa
tgtgtttcagcattatatgaaagaaagactggtaaagtataa
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