Rhopalosiphum maidis (corn leaf aphid): 113560680
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Entry
113560680 CDS
T06065
Name
(RefSeq) m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113560680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113560680
Enzymes [BR:
rmd01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
113560680
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113560680
mRNA degradation factors
5'-3' decay
Decapping complex
113560680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
113560680
NCBI-ProteinID:
XP_026822508
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All DBs
Position
4:complement(15691877..15695541)
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AA seq
444 aa
AA seq
DB search
MIIEMKPVTVKKGDQMKQNKLTKEILDDLSCRFIINVPEVERQNLIRICFQIELAHWFYI
DFYCDEHNLKPYGINQFAQHMFRHIPFLRSRESQVLDVLKEWREYKRSVPTYGAILLNED
MTQVLLVQSYWTKTSWGFPKGKVNQDEDPLNCAVREVYEEIGYDIGSVINKDDYIETVLN
DQINRLYIVPGVSMKTKFSPQTRNEIGSIEWFALDKLPSNRRDHIAAKSLNKHSFYMVLP
FIRQLKTWVVKKRIKGKQNVKPPKNSKQPSKNSKLPLKSSKTLVENPKMVAQKSSKLLSE
NPKSVPVNPKLPPNTLELIDPAIIFTPDRKIENTSFLTSQTQEFFAMFPERYSSPKSPII
VPQPSTPIQQSPSPSTTAEPNAISEAKLKEFFAMFPQCLDVSKSPVAQKDTIASVQVTEN
KSRIKKTSPWPEFKFNTAEIMKYF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgaaatgaagccagttactgtaaaaaaaggagaccagatgaaacagaataag
ttgactaaggaaattcttgatgaccttagctgtcggtttataatcaatgttcctgaggta
gaacgacaaaatttgatacggatttgtttccaaatcgaactggcccattggttttacatc
gatttttattgtgatgaacataatttaaaaccatatggtatcaatcaatttgcacaacat
atgtttcggcatataccatttttgagaagtcgtgaatcccaggttttggatgtgcttaaa
gaatggcgtgaatataaaagatcagtaccaacatatggtgctattctactaaatgaagat
atgactcaagtattgttggtccaaagttattggaccaaaacatcatggggatttccaaaa
ggcaaagtgaaccaagacgaagatccattaaactgtgcagttagagaagtttatgaagaa
attggatacgatattggcagtgtgattaacaaggatgattacattgaaactgtgttgaat
gatcagataaatagattatatattgtgcctggagtcagcatgaaaacaaaattttcacct
caaacacggaatgaaattggatcaattgagtggtttgcattagataaattgccatctaat
cgtagagatcatatagctgctaagagtttaaataaacattccttttacatggtgttacca
ttcatcagacaattgaagacttgggtggttaaaaaaaggattaaaggaaagcaaaatgtc
aagccacccaaaaattctaaacaaccttccaagaattctaaattgcctttaaagagttct
aaaacgctggttgaaaatcctaagatggtggcacaaaagagttctaaattattatctgag
aaccctaaatcggtgcctgtgaatcctaaattgccacccaataccttagagttaattgat
cccgccatcatttttactccggatagaaaaatagaaaatacaagtttccttacttctcag
actcaagaattttttgctatgtttccggaacgatacagttcaccaaaatctcccattata
gtgccccaaccaagtacacctatacaacaatctccttctccttcaactacagctgaacct
aatgctatttcggaagccaaacttaaagaattcttcgccatgttccctcaatgtttggac
gtctccaaatccccagttgcccaaaaggatactattgcttctgttcaggtgaccgaaaat
aaaagcagaatcaagaaaacgagtccttggccggagtttaaatttaacacagctgaaata
atgaaatatttttaa
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