Rhopalosiphum maidis (corn leaf aphid): 113560752
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Entry
113560752 CDS
T06065
Name
(RefSeq) NACHT domain- and WD repeat-containing protein 1
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rmd04990
]
113560752
Domain-containing proteins not elsewhere classified [BR:
rmd04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
113560752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
NBCH_WD40
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Vps41
AAA_16
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_2nd
Beta-prop_WDR75_2nd
AFG1_ATPase
AAA
AAA_19
AAA_22
NPHP3_N
Y_phosphatase
ResIII
Beta-prop_LRRK2
DUF4062
nSTAND3
Motif
Other DBs
NCBI-GeneID:
113560752
NCBI-ProteinID:
XP_026822608
LinkDB
All DBs
Position
1:9364252..9552258
Genome browser
AA seq
1613 aa
AA seq
DB search
MNNEDEVQRVFRGELDTAEWAIPRLVKVFVASTRNDFLEERRCILENVGPDLQNLYDSTG
LEVEFVDMHYGSELDPMKNPFLFAEHLDEIRNCRKVSRGCFFLCLVGDEHQPCPAPVCIA
EDAYEQLKDAAQELNLEWSAVESAYQLDPLNNHYTLPKPNEKDQEQLRLWFEKNEKALVV
MQEASQELLSRGLIVDPQIFHSAVQHQTLHALDLDKDHMVVFNREFTGRHNYESGIDETV
SSFKHFLKDTVSPDNLIELSVEWKPGGIDGEHPEHDMYLTIFQEAVMSKMQSMINTSIEQ
RPELNARNKTIQEVLKEAIVHIAHCKDLIKLNPPNPRMDAVTKIRKMMSTTTKHGPIIIH
GGLGSGKTSIITTIYRECEKWFDKKPVRIVRFSGVTPRASYNLELLRIICEQLTCVLQPT
GLCVPLDASFDPLYISDWFQTLLKRFEDECRSSTLILFIDDLHRLNPLDSDVVAGLSWLP
TVLPFNVHIVCTTLYIPDELKMTPLQKDRFRNSEFYVEQPDVNIETIKTNINNMLDNYEQ
AYGLKAVSKLASYISVSEFGLTETELLELLMPTTGDFGTPLKLEDGNFNFSTFCTAKKTI
MPLLYEKFMSGRILLCWRHKITFDVVMQRYLTSKIQKRTLHMEIGNLFFSEFSKDESESK
TDGSVSKDGETVIQNDMTYSLRHVEESWIHLLKAGDHIRLKELTLCNFDFLLAAVRTISV
SYLRSILEHARCYVLDRDVELVYYTVRKSSDVLTRDTLQLGAQIISWLRPVADSSKLMHR
IIRCSVSWCDGFTDPLLVPHTSWLQPPLPLHIKCVNCGIPIRHIAPTPSAQHVVVIPKEG
DAQLWHTMGNTRVQTFQGHQKPIKCLNVNKNPQLLVTGSEDRSVLVWDLNTYALLAKYTE
LESLVLSLCVATINDGGNKELGVVLGCENSKILLYTLKGKMVRKIDYHKGPVTAVQLTSQ
DVLVTGSSDCTVCLWEMDTLDLLNTIALPGPVEMLDISVDSMFLLVLCEGNQLWLHALAT
GTLIHNLKGYCSKVMSIALAEDCQRAVVAGVDSRVYIYDIHSGDLDLVPISTAPHHKEVI
AVKITNNDDFLVTAGNGKIAYWNFRKMGSAHTINKQSSPLSRKPHTSAITCLDISRDGTM
AVTGGLDSLVNVWHLNVESLENVYQLNNNELHSTMHGHTAAITCLAIASNGLFAVSGSED
KLVLVWGLTVGNAVFTFSGHQSAITAVEVTSDSEKVVSSDKAGVIAVWLSDNGTLLNSVI
CPATNLSVTNNMKYLVSGDGHFSLHIWPLSIKNEGGPWTEKWPVSHTEEITCFVITYDSL
QIITGSKDMSLKVWQINGGKLSQVLVGHEDQVTCVAVAISDKSIVVSGSWDANLIIWDIH
TGDDRHLLTGHLGHVTCVKLSGDGSVALSGSDDKRIIVWDTKRGVPLTSLQLHLPILGLS
MSTDVTRVAVHLYESQYLPITQLMNTPAQYVKVPVFINREHRSLAAKKPMRRMLIKEYSL
DSYTWQRKYAHLTSSITRAAVDEKLRRFSVSASMEEISKQANNNENMGSQNLGPEQAALA
QSQHFDQLIAEWNNKRSPSKSTSRPNVFLSKQNSRSSRQHSADDESHGSDDFI
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgaggacgaggtgcaaagagtgttcaggggcgagttggatacagcggaatgg
gctataccacggttggtcaaagtattcgtcgcgtccaccagaaacgattttttggaagaa
agaagatgtatcctggaaaacgtgggtccagatctacagaacctgtacgattcaactggc
ttagaggtggaattcgtcgacatgcattatggcagtgaattggatccaatgaaaaatcca
tttttattcgcagaacatttggatgaaataaggaattgccgaaaagtgtcccggggatgt
ttctttttgtgtttggtgggcgatgaacatcaaccatgccccgcaccggtgtgtattgca
gaggacgcgtacgaacaactgaaagatgcggcgcaggagctgaacttagagtggtctgcc
gtggagagcgcttatcaactagacccgttgaacaaccactacacgctgccgaaacctaat
gaaaaagatcaagaacaattacgtctttggtttgaaaagaatgaaaaagctttagtagta
atgcaagaagcgtcacaggaactattgagcagaggtttaattgttgatcctcaaatattc
cattcggcagttcaacatcaaactttacacgctctggatttagataaagatcacatggtc
gtgttcaacagagaattcactggaagacacaattatgaaagtggtatcgacgagacggtt
tcatcatttaaacatttcttaaaggacactgtatctccagataatttaattgaattgagt
gtagaatggaaacctggaggtatcgacggtgaacatcccgaacatgatatgtatttgacc
atattccaagaagcagtcatgtcaaaaatgcaaagtatgataaatacaagcattgaacag
agacccgagttaaatgccagaaacaaaactatacaagaagtgctaaaggaagcaatagtc
cacatagcacattgcaaagatctgattaaacttaaccctccgaatcctcgaatggatgca
gttactaaaatacgaaaaatgatgtctacgaccactaaacacggcccgatcatcatacat
ggaggtttaggctccggaaaaacatcgataatcaccaccatttatcgagaatgtgaaaaa
tggttcgacaaaaaaccagtgagaatagtgaggttttcgggcgttacaccaagagcctcg
tacaacctggaactcttgagaatcatttgtgagcagctaacatgtgtacttcagccaacc
ggactttgtgtacctttggatgcctcgtttgacccgctgtatattagcgattggtttcaa
acgctgttaaagcgattcgaagacgaatgcagatcgtcaaccttgattttgttcattgat
gacttgcataggttaaacccattggactcagatgtggtggcgggtctgtcctggttaccg
acagtactgccatttaacgtacatatcgtatgcacaaccttgtacattcctgatgaattg
aaaatgactccactacaaaaagaccgttttagaaattctgaattttatgtggaacaacca
gacgttaatatagagacaatcaaaacaaatattaacaatatgttagacaactacgaacaa
gcgtacggtttgaaagctgtttctaaattagcttcatacatatcagtatccgaatttggt
ttaacagaaaccgaacttcttgagctgcttatgccaacaactggtgattttggaactcct
ttgaaattagaagacggaaatttcaatttttccacattttgtacagctaaaaaaactata
atgcctcttttatacgaaaagttcatgagcggccgtatattattatgttggagacataaa
ataacatttgatgtagttatgcaaaggtatcttacatcaaagatacaaaaaagaacgtta
catatggaaataggaaacttgttcttcagtgaattttccaaagatgaatcggaatctaaa
actgatggttcagtgagtaaagatggagaaaccgttatacaaaacgacatgacgtacagt
ttgagacacgtcgaagaatcatggattcatctgttgaaagcaggtgaccacatcagacta
aaagagttgacgttgtgtaattttgactttttattggcggctgtacgtactatatccgtc
agttacctacgatctatcctagagcacgcacgatgttatgtgttggatagagatgtcgaa
ttggtttattacacagtgagaaaatcgagtgatgtactaacgagggatactttgcagctc
ggggcacagatcatcagttggttacggcccgtggcagatagtagcaaactaatgcataga
atcataagatgttcggtatcgtggtgcgacggttttacagatccgttattggtgccgcat
acgagttggttacagccacctttacctcttcacatcaagtgcgttaactgtggtataccg
atccgtcatatagctcctacgccttcagcgcagcacgtagttgtcataccgaaagaagga
gacgctcaactttggcacacaatgggtaacacgagggtacaaacgttccaaggacatcag
aaaccgatcaagtgtttgaacgtgaacaaaaaccctcagttattagttaccggttctgaa
gaccgtagcgttctagtctgggatctaaatacatacgctttattagcaaaatacaccgaa
ctagaatcactggtgttaagcctttgcgtagcgacgataaacgacggtggcaacaaggaa
cttggcgttgttttaggttgcgaaaatagtaaaatacttctgtacacattaaaaggtaaa
atggtaagaaaaattgattaccacaaaggacctgttacggcggttcaacttacatcgcaa
gacgttttggttacgggttcgtcagattgcacagtgtgcctctgggaaatggacactctc
gacctactcaacactatcgctctgccagggcccgttgaaatgttagacatatcagtcgac
tcaatgttcctgttggttttgtgcgagggaaaccagttgtggctgcacgcactggcgacg
ggcacgctgatacacaacctaaaaggatactgttctaaagtaatgtcaattgcattggcc
gaagactgtcagcgggcagtagtggccggtgttgactccagggtgtacatatacgacata
cattcgggagatttggacctcgtgccaatatctacggcaccgcatcacaaagaagtgatc
gctgtaaaaatcaccaacaacgacgacttcctcgtcactgcgggcaacggcaagatcgct
tactggaatttccggaaaatgggaagcgcgcacacgatcaacaagcaatcgtcgccgttg
tctcgaaagccgcacaccagcgccatcacctgtttggacatatcgagggacggcacaatg
gctgttacaggtggcctggacagtctggttaacgtctggcatctgaacgtagaaagcttg
gaaaatgtctatcagctgaacaacaacgagttgcactccaccatgcacggtcacacagct
gccataacgtgtctggccatcgcttccaacggacttttcgccgtttccggttcggaggat
aaacttgtgttggtctggggcctgactgtgggcaatgccgttttcacgttcagcggccac
caatcggccatcaccgccgtggaggtcacctcagacagcgagaaggtcgtgtccagcgac
aaggctggcgtcatagcggtctggttgtcggacaatggaacgctactcaattcggtgata
tgcccagcgactaatctgtcagtgaccaacaacatgaaatacctagtcagcggtgacggc
catttttcgctgcatatctggccgttatcaatcaaaaacgagggaggaccttggacagaa
aaatggccggtcagtcacacggaagagataacgtgtttcgtgataacgtacgactcgttg
caaataatcaccgggtccaaagacatgtcattgaaagtttggcaaattaatggtggcaaa
ctgtctcaggtgttggtcgggcacgaagaccaagtaacgtgcgtagccgtggccatcagc
gacaaatcaatcgttgtatccggttcgtgggacgccaacctcatcatatgggacatacac
acgggcgatgacagacacctgctgaccggtcatctgggtcacgtgacgtgcgtcaagctg
agcggtgacggttcggtggctctttccgggtccgacgacaaacgcataatcgtgtgggac
acaaaacgcggggtgccgctcacgtctctacaactgcatctccccattttgggcctgtcc
atgtccacagacgtgactagggtagcggtacacctgtatgagagccagtacttgccgatc
acgcagctgatgaacacgcccgcgcaatacgtcaaagttccagtattcatcaaccgagag
cacagatcgctggccgccaaaaaacccatgaggaggatgttgattaaagaatactcgttg
gactcgtacacgtggcaacggaagtacgcgcacttgacctcgtcgataacgcgggcggcc
gtcgacgaaaagctccgccgattttctgtttcagccagcatggaagaaatatcaaaacaa
gccaataataacgagaacatgggatcacagaatctgggtcccgaacaggccgctttagca
caatcgcaacactttgaccaattgattgccgaatggaataacaaacggtcgccttccaaa
tcaacaagccgaccgaacgtgtttttatccaaacagaattcgagatcgagcagacagcat
tcggccgacgacgagagccacggcagcgacgatttcatatga
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integrated database retrieval system
