Rhopalosiphum maidis (corn leaf aphid): 113560868
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Entry
113560868 CDS
T06065
Name
(RefSeq) DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113560868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rmd03400
]
113560868
DNA repair and recombination proteins [BR:
rmd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113560868
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ZGRF1-like_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
113560868
NCBI-ProteinID:
XP_026822782
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All DBs
Position
4:complement(21311235..21316551)
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AA seq
841 aa
AA seq
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MRKSRAPSQQFPLVPKEDIEKGVKIIRSPSEILKLINTCDSTTIKNVSGIVQPDSHTIKN
CIIPLQPPQNTTKNIPKSVQHKRIIKSNIHVSENKDQHEIKENVVQSSNTLGNKKYNVTW
GKQTKKKHKTWEGDGYLIVSDKFAALYDLDDHKLGTTSDLKSLDLEDGSIIVVGNKQVQV
LDLVTEFDAAATEKSTVISCPGPPRKRPKILVDVSSPEALIMPKPDIDHQSCFNKKEDEI
TPVVLEPFLAKHLRPHQKTGIIFLYECVSGFKDQEYFGAILADEMGLGKTLQTICLIWML
LKRGPYRGIPLAKRVLIVAPSSLIGNWENEFTRWLGRDRLRLFSVDQKKKPSEFARLPAR
SYPVMITSYEMLVRYIEEIEKIHFDLMVCDEGHRLKNNSTNTSLALRKIECKRRVLLTGT
PIQNELAEFYALIDFVNPGILGTYSMFKREFEDKIVESQQPECHPQLVSLGKQKASDLNE
VTEKFILRRTQDVNNKYLPSKYESVIFCAMAPIQCRLYEETVSYWENRVQEFGLSTISHF
SVITMLKKVCNHPELLLNNHINSDTTEETLSQHLNRTIVLKHSLIESSGKLIVVDNLLKE
LHKNGSEKTVLISYYTQTLDIFAKLCDKKHYKYLRLDGSTATAQRTEIVKKFNDSNSDYS
VLLLSAKAGGVGLNLVGASNLILYDSDWNPASDQQAMARIWRDGQKKNVHIYRLLTSGTI
EEKIFQRQISKTGLSEAITNPDNQNNTKLSFDQLKDLFNFKKDALCSTHDLLECNCGGKG
LVLSDNSTFECDDKKSEAPLRVNELMKWEHHSSPFNKNVLETMNLSGVSSTIRFLFRNKA
N
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaagtcgtgcaccatcacaacagtttccacttgttcctaaagaggatattgaa
aaaggagtgaaaatcataagatcaccatctgaaattcttaaactgattaatacatgtgat
agtacaacaataaaaaatgtgtctggtatagttcagcccgatagccataccatcaagaat
tgtattatacctttacaacctcctcaaaatacaactaaaaacattccaaagtctgttcaa
cataaaaggataatcaagtctaatatacatgtatctgaaaataaagaccaacatgaaatt
aaagagaatgttgttcaatcatcgaataccttaggaaataaaaagtacaatgttacatgg
ggtaaacaaacaaaaaagaaacacaaaacatgggaaggtgatgggtacttaattgtatct
gataaatttgcagcactttatgatttagatgatcataaattaggtactactagtgactta
aaatctttagatttggaagatggttcaattattgttgttggtaataagcaagtccaggta
ttagatttagttactgaatttgatgctgcagcgactgaaaaatcaactgtcatttcatgt
ccaggacctccccgtaaacgaccaaagatattggtagatgttagttctcctgaagcacta
atcatgcctaaacctgatattgatcatcaatcttgcttcaacaaaaaagaagatgaaatc
actccagttgtgcttgaaccttttttagcaaaacatttaaggcctcatcaaaaaactggc
attatttttttgtatgaatgtgtttctggatttaaagatcaagaatattttggtgctata
ttagctgatgaaatgggtcttggcaagacattgcaaacaatttgtttgatttggatgtta
ctgaagcgaggaccatatagaggtataccattggctaaaagagtactgatagttgcccct
agtagtcttataggaaattgggaaaatgaatttactagatggttaggaagggatagacta
aggctgttttctgtagatcaaaaaaaaaaaccctcagagtttgctagattacctgctcgg
agttatccagtaatgataacttcatatgaaatgttagtgcgttacattgaagaaattgaa
aaaatacattttgatttaatggtatgtgatgagggccatcggttaaaaaataacagtact
aatacatcattagctttaagaaagatagaatgtaaacgaagagttttattgactggtaca
ccaattcaaaatgagcttgctgaattttatgcactcatagactttgttaatcctggaata
ttgggaacgtattcaatgtttaaacgtgagtttgaggataaaattgttgaatctcaacaa
ccagaatgtcatccacaattagtttctctgggaaaacaaaaagcttcagaccttaatgaa
gtaacagaaaaatttattttaagaaggacccaagatgttaacaacaaatatctgccttct
aaatatgaatctgtaatattctgcgcaatggctcctattcagtgccgtttatatgaagag
actgtttcatattgggaaaatcgtgtacaagaatttggtttaagtactatttcacacttt
agtgtcataactatgttaaagaaagtttgtaaccatccagaattattattgaacaaccac
attaacagtgatactactgaagagacactaagtcaacatttgaatcgcactattgtttta
aaacattcattaattgaaagttcaggaaaacttatagtcgttgacaacttattaaaagag
ttgcataaaaatggttctgaaaaaacagttttgatatcatattatactcagactttagat
atatttgcaaagttatgtgataagaaacattacaaatatttgagacttgatggatctact
gctactgctcaacgaactgaaatagttaaaaaatttaatgattcaaattctgattacagt
gttcttttattaagtgctaaagcaggtggtgtcggactgaatcttgttggcgcatctaat
ttgattttgtatgattctgattggaatccagcttctgaccaacaagctatggctagaatt
tggagagatggacaaaaaaaaaatgttcacatttataggttactaactagtggtacaatt
gaagaaaagatattccaaagacaaattagtaaaactggcttaagtgaagccattacaaat
cctgataatcaaaataatacaaaattgtcatttgatcaacttaaagatttatttaatttc
aaaaaagatgctttatgctcaactcatgatttattggaatgtaattgtggtggaaaaggt
ctagttcttagtgataatagtacatttgaatgtgatgataaaaagtctgaagcaccactg
cgtgttaatgaattgatgaaatgggaacatcattcgtcaccttttaacaaaaatgtttta
gaaaccatgaacttatccggagtatcatcaactatccgcttcttgtttaggaataaagca
aattaa
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