Rhopalosiphum maidis (corn leaf aphid): 113560937
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Entry
113560937 CDS
T06065
Name
(RefSeq) spidroin-2-like
KO
K06236
collagen type I alpha
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd04512
ECM-receptor interaction
rmd04518
Integrin signaling
rmd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113560937
04518 Integrin signaling
113560937
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113560937
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rmd00536
]
113560937
Glycosaminoglycan binding proteins [BR:
rmd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113560937
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
113560937
NCBI-ProteinID:
XP_026822874
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Position
4:complement(27205520..27215513)
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AA seq
991 aa
AA seq
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MNTSFLRLLCTLFALSHYTLAQSGYNYNKPSNPLNGPTTLRPYGNDGLVAKPSGTSFPTS
FPTTVSSYPTQADQFGSTGSTGTPSFTGGYGGQTAYPTSAPQDFTTANFPSSTAQRPGSF
PTGSGSSPGYGSSGDGASGPNTRPSYGPSGQESLGAPQSGNGYGVGSGSGFGSGSSRPSV
FGGSSGTPSSTGFGSGNAPGSYGSGNSVGTTGLGSGNAPGSYGSGNSVGTTGFGSGNAPG
SYGSGNSVGTTGFGSGNAPGSYGSGNSVGTTGFGSGNAPGSYGTGNSVGTTGFGSGNAPG
NYGTGNSVGTTGFGSGNAPGYGGSSGSTGFGSNPGSSGFGIGSSPGNYGSNNVGSVGTQG
PNSFGSGNSGSKPNYGGTGIGGPSSVGGGSSGVQGPSSFFGGNGGNQGPSSFFGGNAGSQ
GPTSVGGGNSGLQGPSSFFGGNSGSQGPTSFGNGFGSGNSPTGNNDDGSYEGGDLSAIPG
EPGTDYPILSEIPNTSFTCNQRLPGYYADTETRCQVFHICSNDIKYDFLCPNGTIFHQQH
FVCVWWNQFDCSTAESLYGLNANIYDYSKVGSPGQSGPQGPIANFPGQVGPNGPIGNFPV
ISGPQGPVANYPGQFGPQGPTANYPGQSGPQGPIANYPGQSGPQGPIANYPGQSGPQGPI
ANYPGQSGPQGPTANYPGQSGPQGPIANYPGQSGPQGPTANYPGQSGPQGPTANYPSQTG
PQGPTANYPGQSGPQGPTANYPGQSGPQGPTANYPGQYGPQGPSANYPGQSGPQGPTANY
PGQSGPQGPTANYPGQSGPQGPTANYPGQSGPQGPTANYPGQSGPQGPSSNYPGQYGPQG
PSANYPGQSGPQGPSANYPGQSGPQGPTANYPGQIGSQGPTANYPSQTGAVFPSQRPSSY
PGAQATPAYPSTGVNNNGRPSSQGPYGSSGTTPYPSQGSTVGSYGPSSTTSGVSPTPASY
PGSTSLSDAQFVNSYNKPPVPDREYLPPYRK
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgtctttcttgcggttgctgtgcactctctttgcactatcccattatacattg
gcacaaagtggttataattacaacaaaccatcaaatcccttaaacggtccaactacgcta
agaccatacggaaacgatggattagtagctaagccatcaggaactagttttcctacttca
ttccctacaacagtttcatcatacccaactcaggctgaccaatttggttctactggatct
actggtacacccagttttactggtggatatggtggccaaacagcttatcctacatctgca
ccccaagatttcactactgctaatttccctagttcaactgcacaacgacctggaagtttc
cctactggttctggttcatcgcctggttatggctcttctggcgatggtgcttctggacca
aacacgagaccaagctatggcccaagtggacaagaaagcttaggagctcctcaaagtggt
aatggatatggtgttggatcaggatctggttttggttctggaagctcaagaccaagtgta
tttggtggaagttcaggaacaccaagttcaactggttttggaagtggaaatgcacctggt
agttatggaagtggcaacagtgtaggaaccactggattgggaagtggaaatgcccctggt
agttatggaagtggcaacagtgtaggaaccactggatttggaagtggaaatgcccctggt
agttatggaagtggcaacagtgtaggaaccactggatttggaagtggaaatgcccctggt
agttatggaagtggcaacagtgtaggaaccaccggatttggaagtggaaatgcccctggt
agttatggaactggtaacagtgtaggaaccactggatttggaagtggaaatgcccctggt
aattatggaactggtaacagtgtaggaactactggatttggaagtggtaacgctccgggt
tatggtggtagtagcggttctacaggttttggaagcaacccaggatcaagcggttttggc
ataggtagttcacctggcaattatggaagtaacaatgtcggcagtgttggtacacaagga
ccaaatagttttggtagtggtaacagtggatccaagccaaactatggaggtactggtatt
ggtggacctagcagtgtaggtggtggaagttctggtgtacaaggaccaagcagtttcttc
ggtggaaacggtggtaatcaaggacctagcagtttctttggtggaaatgctggtagtcaa
ggacctaccagtgtaggaggtggaaattctggtttacaaggaccaagcagtttctttggt
ggaaacagtggtagtcaaggacctactagttttggaaatggttttggatctggtaactca
ccaactggaaataacgatgatggttcttatgaaggtggagacttatctgctatacccgga
gaaccaggtacagactacccaatactatccgaaataccaaatacttcattcacttgtaac
caaagattaccaggatactacgctgatacagaaaccagatgtcaagtattccatatatgt
tctaatgatatcaaatacgatttcttatgtcctaatggaacaatattccaccaacagcat
tttgtatgtgtctggtggaatcagtttgattgttcaactgctgaaagtctatatggcttg
aacgcaaatatttatgattactcaaaagtaggttctccaggtcaatcaggcccacaagga
cctatcgcaaacttccctggacaagtcggtccaaatggaccaatcggtaacttcccagta
atttctggtccacaaggtccagttgcaaactacccaggacagttcggaccacaaggaccc
accgccaactatccaggacaatccggccctcaaggaccaattgccaactatccaggacaa
tcgggccctcaaggaccaattgccaactatccaggacaatcgggtcctcaaggaccaatt
gccaactatccaggacagtcaggaccacaaggaccaacagccaactatccaggacaatcc
ggccctcaaggaccaattgccaactacccaggacagtcaggaccacaaggaccaactgct
aactacccaggacaatctggaccacaaggaccaaccgccaattatccaagccaaactggt
ccccagggtccaacagctaactacccaggtcaatcaggtcctcagggtccaactgccaac
tacccaggacagtctggtccccaaggtccaactgccaactacccaggacaatatggtccc
cagggtccatcagctaactacccaggtcaatcgggtcctcagggtccaactgccaactac
ccaggacaatcaggaccacaaggtccaactgccaactacccaggtcaatcgggtcctcag
ggcccaactgccaactacccaggacagtctggtcctcaaggtccaactgccaactaccca
ggtcaatcgggtcctcagggtccatcatccaactatccaggacaatatggtccccagggt
ccatcagccaactacccaggtcaatcgggtcctcagggtccatctgccaactacccagga
cagtctggtcctcaaggtccaactgccaactatccaggacaaataggatcacaaggccca
acagcaaactatccatcacagacaggtgcagtattcccaagtcaacgtccaagtagctat
ccaggtgcacaagctacaccagcatacccatcaacaggtgtgaacaataacggtcgacca
agttctcaaggtccgtatggaagttcaggcacaacaccttaccccagtcaaggaagtact
gtgggatcatatggtccaagctcaactacatcaggtgtatcgccgactcctgcatcatac
ccgggatcaacttccttatctgatgcacagtttgtaaactcatacaataaaccaccagta
ccagacagagaatacttgccaccgtatagaaaatga
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