Rhopalosiphum maidis (corn leaf aphid): 113561015 Help Entry 113561015         CDS       T06065                                  Name (RefSeq) collagen alpha-1(V) chain-like   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism rmd  Rhopalosiphum maidis (corn leaf aphid) Pathway rmd04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:rmd00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     113561015  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:rmd00536]     113561015 Glycosaminoglycan binding proteins [BR:rmd00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    113561015 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_3 Laminin_G_2 Glyco_hydro_59_C Laminin_G_1 Motif Other DBs NCBI-GeneID:  113561015 NCBI-ProteinID:  XP_026822984 LinkDB All DBs Position 4:complement(12406652..12488398) Genome browser AA seq 1656 aa AA seqDB search MARTPVVVFALIAAIGLLRNADAADRWARAADRTTKNGFSILEATNIAEQNVGVSVTSGR CANDKAYKLNERAILSIETSQIFPEFQQFPLDFSILAEIRTDQGSDTNRVFLIYNEAGDE QLGLTVGSDIMLFYNDMEAHEGYKTKIKFNTIINDNRWHKLLFSIKGDSVTMILDCDKQV TKELKRNTTISNSGIVMIGQQLDETFYLGDIQELRFYSTPDAAYEMCSVGMDVCIETQNK TETSKTNVMDVNEFEELSTSDMNSLEITSVTHSPRSSDTNISQTAYGVQQPQCMSAVRGY PGPPGEQGPQGPKGDPGRDGIDGYAGKQGPPGHVFLIPLNQNQGDKGPDSQAEIFRQMLA QHMLSMRGVDGPMGMTGVVGPEGPPGPEGPKGESGEQGEVGPRGIRGMPGPSGRDGHRGR PGRDGERGVTGPPGVKGEPGVTGAMGLPGEKGDRGLPGQVGVTGPRGNDGPQGEEGPQGL AGLPGEMGPRGFSGLRGFPGSPGPPGVPGSEGPAGPKGNTGNTGIPGPPGQIGPAGPIGS TGAIGALGPPGDQGPPGKPGLPGLPGADGLPGHPGNAGAVGIKGDTGPIGSPGPVGFSGT RGVKGDIGVRGPMGEKGDKGDRGSDGEKGDQGLKGEPGLAGSPGLVGIEGPEGPKGSEGP HGESGAIGLSGEKGKPGPAGLPGYPGAPGEKGDKGAYGKDGISGEKGERGNTGLPGERGE TGPRGFRGARGREGSEGIPGPKGDTGQPGPTGAPGERGIPGADGLRGFVGPTGAPGISGK DGLPGFPGERGPPGDTGPIGVTGIPGVVGPPGQSGEIGSIGEPGPSGQPGLPGEAGRPGD AGKEGLPGPVGLPGKSGEPGSPGLQGFPGDRGFPGVPGAAGLKGDTGPPGPVGSTGDKGQ QGESGKEGPQGAEGRKGPTGTPGAVGLKGDKGEIGLSGPMGNDGMVGARGVPGPPGPVGP PGEDGDKGEIGVPGEKGFKGSKGETGPVGALGNPGLRGEPGPVGVPGEKGPIGEIGRQGA KGEEGSIGIAGPPGLPGTQGIPGPIGPKGEPGDIGAKGPVGQPGAAGEIGPRGFKGVDGQ YGPAGADGPTGPKGEPGVIGPPGPQGLDGKHGERGPMGAKGDDGKIGTQGPIGPRGNIGP EGPKGNAGVPGFPGTQGEPGIQGPKGDRGRDGDDGKIGAPGPPGEIGPPGNPGIVGPPGR TGNEGPSGPQGSSGLPGEKGDQGLIGGTGLPGPIGISGTPGAQGPQGPIGSPGLAGEVGL PGRPGKDGEPGKTGEIGPPGEKGERGKRGPKGHPGEIGPMGIKGHEGEKGDKCERGDRGS EGQKGEMGPIGLIGTKGNDGPVGLPGVEGFPGPKGIEGVAGNKGEQGSPGPPGPPGPPGE LPMLPPELAGFQQNALARWKREFNDVNTEDGTKSKTSNSGQSDNSDGPKYIDIVSSIYSM RQDLERIRKPVGTRDNPVMTCKDLFYGHPQFKDGWYWIDPNLGMPYDAVYVYCNMSSGGE TCVFPDIHSSQMPNIPWRKEGDKTDWYSNLRGGFKITYETVGPVQMNFLRLLSQNGYQNF TYTCINSAAWFNAKSNSYDMAVKFMGENSVQFSSEQGSPKVDVLVDGCKTRKSKSETVFE IRTNKLDSLPLTDFYPVDYGLPHQAFGFEVGPVCFK NT seq 4971 nt NT seq  +upstreamnt  +downstreamnt atggcccgaacgcccgtcgtggtttttgcactgatcgcggccatcggtctgctgcgaaac gcggacgcggcggatcgctgggcacgggccgctgacaggacgacgaaaaacggttttagc attttggaagcaacaaatatcgccgaacaaaacgtgggcgttagcgtcactagtggccgt tgtgctaacgacaaggcgtacaaacttaacgaaagagcgattttaagtatagagacgtct cagatatttcccgagttccaacaatttcctttagatttttcaatattagccgagatcaga actgaccaaggttccgatacgaacagagtttttctcatttacaatgaagcaggagatgaa cagttgggattgacagttgggagtgacattatgttgttttataacgacatggaagcccac gaaggatataagaccaaaataaaatttaatactatcattaacgataatcggtggcataaa ttattgttcagtattaaaggagattcagtgactatgattttggactgtgataaacaagtc acaaaagaacttaagagaaatacaacaattagcaattcaggaatagtgatgattggtcaa caattagatgaaacgttttacctgggtgacattcaagagttaaggttttattcaacgcca gatgctgcttatgaaatgtgttccgttgggatggatgtctgtattgaaacgcagaataaa accgaaacatcaaaaaccaacgtgatggacgtaaatgaatttgaagaactttctacgtcc gacatgaattcattggaaataacgagtgttacgcatagcccaagatcgtccgatacaaac atcagtcagaccgcgtatggtgtacagcaacctcagtgcatgtcggcagttcgtggttat cccggtccacctggagagcaagggccccaaggtccgaaaggagatcctggccgcgatggc atagacgggtatgctggtaaacaaggacctccgggacacgtgtttctaataccactgaat caaaatcagggggataaaggtccggatagccaagctgaaatattcagacaaatgttggca caacacatgttatcaatgagaggagttgatggaccaatgggtatgactggagtagtggga ccagaaggtccacctggtcccgaaggacctaaaggagagtctggagaacaaggagaagtg gggccaagaggtattagagggatgcctggtccatcaggtcgtgatggacacaggggtaga ccgggcagagatggagaacgaggagttacaggtccacctggagtcaaaggagagcccgga gtaacgggagcaatgggattacctggagaaaaaggagatcgtggacttccaggtcaagtt ggtgttacaggccctcgtggtaatgatggtcctcaaggtgaagaagggcctcaaggttta gctggcttacccggagaaatgggacctagaggattttctggtctgcgcggatttcccggt tcacctggtcctccaggagttccaggatcagaaggacctgcaggtcctaagggtaacact ggaaatactggaattcctggaccacctggtcagattggtcctgctggtcccattggctcc actggagcaataggtgctttaggtcctcctggagatcaaggacctccgggaaaaccagga ttgccaggattaccaggagccgatggactacctgggcaccccggaaatgcaggcgctgtg ggaatcaaaggagatacgggaccaattggatcaccgggtcccgtagggttttccggaaca cgtggtgtaaaaggtgacataggcgttcgtggtccaatgggagaaaaaggagacaaagga gacagaggatccgacggagaaaaaggagatcaaggactcaaaggagagccaggattggct ggatcaccaggtttagttggaattgaaggtccagaagggccaaaaggatctgaaggacct catggtgaaagtggtgcaattggattatcaggtgagaaaggtaaaccaggacccgccggg cttccaggatatcccggtgctccgggtgaaaaaggtgacaaaggagcatatggtaaagat ggaatttctggtgaaaagggagaacgaggaaacactggattaccaggagaaagaggagaa actggacctagaggattcagaggtgctagaggacgtgaaggatctgaaggaattccggga ccaaagggtgatactggacaacctgggcctactggggcacctggagaacgtggaataccg ggtgcggatggattaagaggatttgtcggccctacaggcgccccaggaattagtggaaaa gatggtttacctggatttccaggagaaagaggtccaccaggtgacacgggacccataggt gttactggaatacccggagtcgtcgggccaccaggtcaatcaggcgaaataggctctatt ggagaaccagggccatcaggtcaaccgggtttaccaggagaagcaggaagaccgggcgac gcaggaaaagaaggacttccaggcccagttggtttgcctggaaaatcaggtgaacctggt tcaccaggattgcaaggatttcctggtgatagaggatttcctggagtacctggagcagct gggctaaaaggtgacacaggacctccaggccctgttggctcaactggagataaaggacaa caaggtgaatctggcaaagaagggccacagggtgcagaaggacgcaaaggacctacaggt acaccaggtgcagtgggtttgaaaggagataagggtgaaatcggactttctggtccaatg ggaaacgatggaatggtgggagcacgaggcgttccaggaccaccagggcccgttggacca ccaggagaagacggagataaaggtgaaatcggcgttcccggagaaaagggattcaaaggt tcaaaaggggaaacgggtccggtcggagcattaggaaatccaggattaagaggagaacca ggaccagttggggtgccaggagaaaaaggtccaatcggtgaaattgggagacaaggagct aaaggagaagaagggtctattggaattgcaggaccacctggactaccagggacacaaggt atcccaggaccaattggaccaaaaggcgagcctggggacattggcgccaaaggtcccgtc ggacaacctggagcagctggtgaaatcggccccagaggatttaaaggtgttgacggacag tatggtccagcgggtgcagacgggccgacaggacctaaaggtgagccaggtgtaattgga ccacctggtccacagggtcttgatggaaaacacggcgaacgcggtccaatgggtgcaaaa ggagatgacggaaaaatcggaacgcaaggaccaataggaccaagaggtaacattggacca gaaggaccaaaaggtaatgcaggtgttcctggatttccaggaactcaaggtgaacccggt attcaaggtccaaaaggcgacaggggtcgagacggtgatgatggaaaaataggtgctcca ggacctccaggtgaaattggcccacccggtaatccaggtatcgtgggtcctccaggacga actggaaacgaaggtccatcaggacctcaaggaagttcaggattacctggagaaaaaggc gatcaaggtttaatagggggtacaggtttacccggacctattggaatatcaggtactcct ggtgcacagggacctcaaggaccaataggttcacctggcttagcgggtgaagttggttta ccgggaagaccagggaaagacggagaaccaggaaaaactggtgaaattgggcctcctggt gaaaaaggagaaagaggaaaacgtggaccaaaaggtcatcctggagaaataggtccaatg ggcatcaaaggtcacgaaggcgagaaaggtgacaagtgtgaacgaggagatcgaggatct gaaggacaaaaaggagaaatgggtcccattggattaataggaactaaaggcaatgatggt ccagttggacttccaggtgttgaaggttttcccggtcctaaagggattgaaggagtagct ggaaacaagggtgaacaaggatctccaggaccaccaggtcctccaggaccaccgggtgaa ttaccgatgttaccacctgaattggcaggctttcagcaaaacgctttggcacgatggaag cgggaattcaatgacgtcaacacagaagacggtacaaaatcaaaaaccagtaattcggga caaagtgacaatagcgatggcccaaaatacatagatattgttagttcaatttacagtatg agacaagacttggaaagaataagaaagcccgtcggaacccgcgataacccggttatgaca tgtaaggatttattttacgggcatccgcaatttaaagatggatggtattggattgacccg aacttgggtatgccatacgacgccgtgtacgtgtactgtaacatgagtagcggaggagaa acgtgcgtgtttcccgacatacactcaagtcaaatgccgaacatcccgtggcgtaaggaa ggcgacaagacggactggtattcaaatctcaggggcggtttcaaaattacttacgaaacg gtgggaccagtgcaaatgaacttcctacgattgctcagccaaaatggataccaaaacttc acatacacgtgcatcaacagtgctgcgtggttcaatgcaaaatccaactcgtatgacatg gccgtaaagtttatgggagagaattcggtgcagttttcatctgaacaaggatcgcccaaa gtagacgtgttagtcgacggttgcaaaacgagaaaatcaaaaagtgaaaccgtatttgag atccgtaccaataaattagacagtctgccgttgacagatttctatcctgtggactatggg ttaccacatcaagcattcggattcgaagtgggacccgtgtgcttcaaatga

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