Rhopalosiphum maidis (corn leaf aphid): 113561056
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Entry
113561056 CDS
T06065
Name
(RefSeq) TBC1 domain family member 9 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rmd04131
]
113561056
Membrane trafficking [BR:
rmd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
113561056
Endosome - Golgi transport
Rab GTPases and associated proteins
113561056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
MFS_2
Motif
Other DBs
NCBI-GeneID:
113561056
NCBI-ProteinID:
XP_026823055
LinkDB
All DBs
Position
4:5530886..5539166
Genome browser
AA seq
1049 aa
AA seq
DB search
MWVNPKEVLIPNALWQNEKISVYFVLQHRVGHGQGNKLSSLLVGTFDSLFETKPSPYRIL
HQTSKSEVYYEIACALTESDIIKDWEWLENNLDLKIFENEDDVTDFVCCKIKSLVATNIS
ETPDEENSESFKDASIKFHRLFNVSRDTTLVCYYSCSYLKKNIPRRGWLYLSVEYLCFYS
YLLGIEDKIVVRWTDVINLDKNNGMLTDTIKVTTRDKREYKFFMFLHSSDTYDLMKQLVN
LAMKGIINDVWFNKDHNLLLKVNKYVPKRQSFVKRDLDARALSETYRLLFRLPLNEKLDG
ITNATLNTYNKKHVFGQVYLSQNFLCFNSKTKDPLNVIIPLCDVSQVEKLEPIPNDTSFD
NAIIITLKQTNDNKKPPFFIFSQIIEREFFLKNISDFLGSLKTRSISKLQVVDSISDNEI
KQPLRFTFRMKEQDNAIIKIKQRTKEVKWEIYFKEHGDSISMYRTKELVKLVLEGIPESL
RSNLWLKFSGAYHDMVANPGLYNELVNIASTTKSISHDEIERDLHRSLPEHPAFQSEIGI
NALRRVLTAYATKNPQIGYCQAMNIIASVLLIYCTEEEAFWQLACICENMLPDYYNNKVV
GALVDQGVMDNLIANHLPFIYDILSRLGLIQMISLSWFLTIFLSVMPYQSAIHIVDWFFF
DGAKVIFQVALSILEMNQKRLACCRDDGEAMQTLCNYLSGIYNEEFEQSELYKDGDKINK
SVSVQELIDNGYKKFRSVNSKTIENLRVMNRLKVVQSLEDGNEKNIVRSLVSDNYFLPDE
LMNLLRFVREEVVSMHKRTPVQPLKAETPMEPYESYRIDFHLFEIMFMAISPLAKNNSVN
NLAVRLFKLMDKNDDGFLNFRELTEALGLTSTVDVSIRLKILYLLHLSPLLSNDLLSATE
PNISESGAEYASDAAEYFSADISSGIICESNLNDLKTLRSITNWKHSTTYLPTMSEERFV
ALCKTMYNLIENSPRDQEMHNNISKISAILLELGNLNKEESNKFENRNDSEWFINAEQFV
ATALTVQKLVEFIGVRGNVLQALHKLRNN
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgaaccccaaggaagtgttaatccccaacgctctttggcaaaatgaaaaaata
agtgtatactttgtgttacaacaccgcgtcggtcatggacaggggaataaattatcttca
ttattagttggaacatttgatagtctttttgaaaccaaacctagtccttacaggatctta
catcaaacatcaaaatcagaagtgtattatgaaatagcttgtgcattaactgaatcagat
attataaaagattgggaatggctggaaaataacttggatctcaaaatattcgagaatgaa
gatgatgtcactgattttgtttgctgtaaaattaaaagcttagtagcaactaatatatct
gagacaccagacgaagaaaattctgaatcatttaaagatgcatctataaaatttcatcgt
ctgttcaatgtgtcacgtgataccactctagtttgttattattcttgcagctatttgaaa
aagaatatccctcgtcgaggttggctttatttgtctgtagaatatttatgtttttattca
tatttgttgggaatagaagataaaatagttgtaagatggaccgatgtaattaatttggat
aaaaataatggtatgttaacagatacaattaaagtgacaacaagagacaaaagagaatat
aaattttttatgtttctacattcatcggatacatatgatttaatgaagcaattagttaat
ctagcaatgaaaggaattattaatgatgtgtggttcaataaagatcataatcttcttctt
aaagtcaataagtatgttcctaaaagacagtcttttgtgaaacgtgacttagatgcaaga
gcattgtctgaaacatatcggcttctatttcgattacccttaaatgaaaaactagatgga
attactaatgctacattgaatacatacaataaaaaacatgtgtttggacaagtatactta
tctcaaaactttttgtgttttaatagtaaaacaaaggatccattgaatgtgattattcca
ttatgtgatgtatcgcaagttgagaaattagaacctatacctaatgatacgtcatttgat
aatgccattataataactttaaaacaaacaaatgataataaaaaacctccatttttcata
ttttcacaaattatagaaagagaatttttcttaaaaaatatatctgactttttaggcagt
ttaaaaacaagatcaatttctaaattgcaagtggttgattcaatatcagataacgaaata
aaacaaccattgagatttacttttcgaatgaaagagcaggacaatgctattatcaaaatc
aaacaacgaactaaggaagttaaatgggaaatatacttcaaagagcatggagacagtatt
tcgatgtatagaacaaaagaattagttaaattggttttagagggcataccagaatcgttg
agatcaaatctttggctaaaattttctggtgcttaccatgatatggtggcaaatccagga
ctatacaatgaattagtaaatattgcttctacaactaaatctatatctcatgatgaaatc
gaacgagatttacatagatcattacctgaacatccagctttccaatctgaaattggtatt
aatgcattgcgtagagtccttacagcctacgcaacaaaaaatcctcaaattggttactgc
caggccatgaatatcattgcatctgtgttgttaatttattgtacagaagaagaagcgttt
tggcagttggcctgcatttgtgaaaatatgttaccagattattataacaacaaagtagta
ggagctttagttgaccaaggagttatggataatcttatagcaaatcatttaccatttatt
tatgatattttgtctagacttggtttgattcaaatgatatcattatcttggtttcttaca
atatttctcagtgtgatgccatatcaaagcgcaattcacattgttgattggtttttcttt
gatggagctaaagtcatatttcaagtggctttatctattttagaaatgaatcaaaaacga
ttggcttgttgtcgtgatgatggtgaagccatgcaaactttgtgcaattatttatcagga
atctataacgaagaatttgagcaaagtgaattatataaagatggtgataaaataaataag
agtgtgtcagttcaagaattaatagacaatggatacaaaaaatttagatctgttaatagt
aaaactattgaaaatcttcgtgtcatgaatagacttaaggtggttcaatcattggaagat
ggaaatgaaaaaaacatagtcaggtcattagtctcagataattattttttaccagatgaa
ttgatgaatttgctaagatttgttagagaagaagtagtttctatgcataaaagaactccc
gttcaaccactcaaagcagaaacacctatggaaccttatgaatcttatagaattgacttt
catctatttgaaatcatgtttatggcaatttcccccttagctaaaaataatagtgttaat
aatttggcagttcggctatttaagttgatggacaaaaatgatgatgggttcttaaacttc
cgtgagttaacagaagcattaggcttaacatctactgttgatgtatctataaggctaaaa
attctttatttactacatttatcaccacttctttcaaatgatttactgtctgcaactgaa
ccaaatatttctgaaagtggagctgaatatgcctctgatgctgctgaatattttagtgct
gatatttcaagtggtataatttgtgaatcaaacttaaatgatttaaaaacactaagaagt
attactaattggaaacattctacaacttatttaccaaccatgtctgaagaacgttttgtt
gcattgtgtaaaactatgtataatctcattgaaaattcacctagagaccaagaaatgcat
aataacatatcgaaaataagtgctattttattagaacttggaaatttaaataaagaagag
tcaaataaatttgaaaatagaaatgacagtgaatggtttataaatgcagaacaatttgtt
gctactgcattgacagtacaaaaactggtcgagtttattggtgtaagaggtaatgtctta
caagctctacacaaattgagaaataattaa
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integrated database retrieval system
