Rhopalosiphum maidis (corn leaf aphid): 113561058
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Entry
113561058 CDS
T06065
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rmd02000
]
113561058
03037 Cilium and associated proteins [BR:
rmd03037
]
113561058
Transporters [BR:
rmd02000
]
Other transporters
Pores ion channels [TC:
1
]
113561058
Cilium and associated proteins [BR:
rmd03037
]
Other cilia and associated proteins
Stereociliary proteins
113561058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
113561058
NCBI-ProteinID:
XP_026823061
LinkDB
All DBs
Position
4:complement(37590119..37648342)
Genome browser
AA seq
1447 aa
AA seq
DB search
MDFHQVPEKQTRRRSRTVSWDHSVRADGESLTCKTTTDRGVLSPQGITSPGPRDSSTTEL
FFDDDMSISRGHSVEKVRFSASRAHSDENDEDYSASVNAILHKRLSVRKGKHLKQRRSSS
PVSSMLPDDASLISDRRRSSAFTTSSGDTAINIEEAGISQEQIFENIRLHKEVLGSVRQQ
PWSIRRKMKLVQQAKEYVKKHEGQLQERLAMSKSTRDIMARFHIVLVKQWQHSKREMANF
ISQIIPWELTIKEIESQFGTVVASYFTFLRWLFWVNFVISVLLAAFVVMPEILTTNKADT
GERKTLLPEEQATSMELMTLLNFEGVLQHSPMFYGYYSNRQSSDTGYRLPTAYFITGLVV
YIYSFVATLRKMAANSRLSKLSEKDDECIFTWKLFTGWDYMIGNEETAHNRISSIILGFK
EALLEEAERMKDKQNWKVVALRIFANLNMVWMLGSSVYAVILVVARSTEPEAEATMWRKY
EITVVMTLIGTFFPIAFEVLGVLESYHPRTTLRVQLARIMALNLLNLYTLTFALFVKIND
MTKELLTLKSNVSNMTANAATRATTATMASTATAATIATAATMATTTSMLKTTSTTSVLV
ALAFMNSTMSNMTKLQLPVTHTIDTQPNCYRQQIECPFSWPGVQYVTADVHSPKMKDYVS
SSIAPLEFSTTGTDFSSVVDLGSDVDFGQTTGVFGANRNGGTGWTESTAETTFKTIDDLR
ITAEVIYDDTLSSSEDNATTSEFDVSSTHSYDETTEKSTIGLVTAESMSDNSTVDTVDDW
STTTYPMNVSLYLSSIASQSISSSTQSVIGEMIPGEYAESTSTVVPESTASPDTEILMSN
MTIDQSIITIDNDDELYSTIASDDLQLLRTDEIIASSERRRIVKRMSEVIFNGTHCFQVV
CSSPSPVTNVTEVPNSSQGFSEESTEEYVTTTEHEDAPREDLSLRATCLNLQIRRRLRKL
CWETMFGQELVKLTVMDLVSTIISTIFVDFARAVFVRYMNRCWCWNLEKRFPQYGDFKIA
ENILHLVNNQGMVWMGMFFSPGLPIINVVKLMIMMYVRSWAVLTCNVPHDVVFRASRSNN
FYLGLLLTMLFLCVLPVGYAIVWIEPSWHCGPFSQYKKIYHIFTNSIKKTVPNPLVHRIL
DYIASPAIVIPLLLLLILIIYYLASLTSSLREANNDLKTQLRRERTEERRKMFQLVNRKK
HGSGVDDDDEDDYTCMDTTLAKWRHIMPDSKTQTDVPSSVFEIAEKKLTDNEVLDRVREK
LVHIEAEDQEPENKHHPSRDDQQQQQQTQPPHIKLQRNLHHHQPPLLQHHYHHHHHHQQH
LYHHLRRPSRSEEPRDTAATLRKWKKSKVVRHLSSESESSDQSEAVPETREPVQPQITTT
SHGSGLHHRTTAAELPVSGAAVEEGGSTTALDQPVKQRARLKLAQILYKEARRRRQKYVE
ELQNQQE
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggactttcaccaagtaccggagaaacagacgcgtagacgcagccggaccgtcagctgg
gaccattcggtcagagcggacggagagtcgttgacttgcaagacgacaacggacaggggt
gttctatcaccgcaggggataacgtcaccgggtccacgtgattcgtcgacaacagaattg
ttttttgacgacgacatgagtattagcagaggacattcggtagaaaaggttcggttttca
gccagccgggcgcattcggacgaaaacgatgaggattattcagctagtgtaaatgcgata
ctccataagcggcttagtgttaggaaaggcaaacacctaaagcaacgaagatcgtcttct
cccgtgtcttcaatgttacccgatgacgctagtttaatatcggatcgaagaagatcgtca
gcttttacaaccagctctggagatacggcgatcaacatcgaagaggctggtatctctcaa
gagcagatatttgaaaacatccgtttacacaaagaggtattaggcagtgtccgccaacaa
ccgtggtccatacggaggaagatgaaattagttcagcaagccaaagagtatgtaaagaaa
cacgagggtcagctacaagaacgtttggcaatgagtaaaagcacgagagatatcatggcg
cggtttcatatagtcttagtcaaacaatggcaacacagtaaacgggagatggccaatttt
ataagtcaaataattccgtgggaactaacgatcaaagaaattgaatctcaattcggcacg
gtagtcgcttcgtacttcacgttcctccgctggttgttctgggtgaactttgttatatcc
gtgttgttggcagccttcgtcgtcatgcccgaaattttgacgaccaataaggcggacacc
ggagagcgcaagacactgttgcccgaggagcaggccacttctatggaattaatgactttg
ttgaattttgagggagtcctacagcattcacccatgttttacggctactattcaaatcga
caaagttcggacaccggataccggctacccacggcctactttatcacggggctcgttgtt
tacatctatagtttcgttgctacgctcagaaaaatggctgcaaactctcgtctgagcaaa
ctgtccgaaaaagacgatgagtgcatttttacgtggaaactgttcaccgggtgggattac
atgatcggaaacgaagaaaccgctcacaatcgtatatcgtccattatacttggttttaaa
gaagcgttgcttgaagaagctgaaagaatgaaagacaaacaaaattggaaagtggtggct
ttgagaatatttgcaaatctgaatatggtatggatgctgggaagttcggtttatgccgtc
attcttgtagtagccaggtccacagaaccagaggctgaagccacaatgtggagaaaatac
gaaatcacagttgtcatgacgctcattggcacgttctttccgattgcgtttgaagtgttg
ggcgtgttggagagttaccatccgaggacaactctccgtgtacaattagctaggattatg
gcgctgaacttgttaaatctttacacgctgacgtttgcgttgtttgtgaaaatcaacgac
atgaccaaggaactgttgacgttgaaatccaatgtatccaatatgacagccaatgcggct
accagggctaccacagctaccatggcttctacggctaccgcggccacaatagccactgca
gccaccatggcaactacgacttctatgttgaagacaacttcgactacctcagtactggta
gcattagcattcatgaattctactatgtcgaacatgacaaaacttcaattgccagtcacc
catactattgatacacaaccgaattgctatcgacagcagatagaatgtccgttctcgtgg
ccgggtgtccaatacgttacagctgacgtacattcaccgaaaatgaaggattacgtttcc
tcatcgattgcgccactggaattcagtacgactggaaccgacttttcatcggtagtagat
ttaggttccgacgtggacttcggtcaaactacaggtgttttcggtgcgaatcggaatggt
ggcaccggatggactgaaagtacggctgaaacgactttcaagaccatcgacgatctacga
ataaccgccgaggtcatatacgacgacacgttatcatcgtccgaagataatgccaccacc
tccgagttcgacgtcagctctacacatagttatgatgagacgacagaaaaatcgactata
ggtttggtcacagctgagtcgatgtcggataattcaaccgtggatacggtcgatgattgg
tcaacaactacatatccgatgaacgtttcattatacttaagttcaatcgcctctcaatcg
atatcgagttcgacacagagtgtaatcggtgagatgataccgggtgagtacgcggagtca
acgtcgaccgtcgttcccgaatcaacggcaagtccagacacagaaatattgatgtcgaac
atgacgattgatcaatcgataatcactatagataatgacgatgagctatatagtacaatt
gcttccgacgatcttcagttgttgaggacggacgagataattgcgtcatctgaaaggaga
agaatcgtaaaacggatgtcggaagtaattttcaatgggactcattgctttcaagtagtt
tgttcgtctccatcaccagttacaaatgtaaccgaggtgccaaacagttctcaaggattt
agcgaggaatcgaccgaagagtacgtgacaacgacggaacatgaagatgcacctagagaa
gatttatctcttcgtgcaacttgtttgaacctccaaatcaggcgacgattgcggaagtta
tgttgggagacaatgtttggacaagaattggtaaaacttacagtcatggatttggtgtcg
acaatcatctcaacgatatttgtggactttgcacgtgcagtgttcgtgcggtacatgaac
cggtgctggtgctggaacttggagaagcggttcccacaatacggtgatttcaagatcgcc
gagaacatattgcatctggtcaacaaccagggtatggtgtggatgggcatgttcttttct
cccgggttgcccatcataaacgtggtaaaattgatgatcatgatgtacgtgcggtcgtgg
gcggtgctcacatgcaacgtacctcacgacgtcgtgtttcgagccagccggagcaacaac
ttctacctgggactgctactcaccatgttgtttttgtgtgtgttaccggtcggttacgcc
atcgtgtggattgaaccatcgtggcactgtggaccattctcgcagtacaaaaaaatctat
cacatcttcaccaactccatcaaaaaaactgtacctaacccgctggtgcatcggatactt
gactatatagcatcacccgccatcgttataccattgctgttgctcctcatcctcataatt
tattacttggcatcgctcacatcatcactccgagaagccaataacgacttgaaaacgcaa
ctaagacgtgagcgaaccgaagaacgacgaaaaatgtttcagttagtaaacaggaagaaa
cacggtagtggcgtcgatgacgatgacgaagatgattacacgtgcatggatacaacgttg
gccaagtggagacatataatgccagacagcaaaacgcagacagacgttccgagctctgtg
ttcgaaatcgccgagaaaaagctcacagacaacgaggtgctggacagagtccgtgaaaaa
ctcgtgcacatagaagcggaggatcaggaacctgaaaacaaacaccatccaagtcgagat
gatcaacagcaacaacagcagacgcaaccgccgcacataaagctccaacgcaatcttcac
caccatcagccacctctactgcaacaccactatcaccaccatcaccatcaccagcagcat
ctctatcaccacctacgccggccgtcgagaagcgaagagccgcgggatacagcggcaacg
ctgcgtaagtggaaaaaatctaaagtggtccggcatctgtcatcagagtcggagtcgtcg
gatcagtcggaagcggtaccagaaacccgtgaaccggttcaacctcagataaccactacc
tcacacggttctgggttacatcacaggaccacagccgccgaacttccggtcagcggtgcc
gccgttgaagaaggcggttctacgaccgccttagatcagcccgttaagcagagggccagg
cttaagttggcgcagatactgtacaaggaagcgcggaggagaagacagaaatacgtagag
gaactacaaaaccaacaggaataa
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