KEGG   Rhopalosiphum maidis (corn leaf aphid): 113561065
Entry
113561065         CDS       T06065                                 
Name
(RefSeq) negative elongation factor B
  KO
K15180  negative elongation factor B
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113561065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rmd03021]
    113561065
Transcription machinery [BR:rmd03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     113561065
SSDB
Motif
Pfam: COBRA1
Other DBs
NCBI-GeneID: 113561065
NCBI-ProteinID: XP_026823068
LinkDB
Position
1:complement(70433069..70435386)
AA seq 590 aa
MSGGRQRSMFTVHPNQQSESGIHGQTYLLETLTNCTDPLKAIEEFQVDNGIHLPSLRQML
PLLDLHGIRRLDFHNSILEALRDKLVAHIEEIGKKEGRDRDRKLKDMLAKSFPSVHIKQL
RPIIMAILKNISHIDDKYLNVLVKDTELYKDTDTEVKRQIWKDNQSLLVNEVSPLLTQYI
REKENILFDHNNLTNLFFTPSPKLRRQGEVVQKLAHMIGSSIKLYDMVLQFLRTLFLRTH
NVHYCTLRAELLMALHDLEIQDIISIDPCHKFTWCLDACIRERNVDVKRSRELQGFLDSI
KRGHETVLGDLSMTLCDPYAINFLATSTIRILHHLINNENLPRENHVLVLLLRMLSLGLS
AWVMIDTQDFKEPKLDSQVVTKFMPALMSLMVDDQVRSLNTKMPLDERESAITIIEHSGP
VPDAVQAYIQESSVACTVAMYYTLHVAKAKDRLALMRILGSLANCDHDRAFEDPFLHFLV
ALLIQQVEEFAAEDFCTVIFDEFFCTGLSRENVVRHVLKLVWHVYPKLPPSRLSTLTKVL
QPSSTHDEAVHKLYTDFVEKISTDTEPPPEPPSFDYLESPLMSVPTPSHY
NT seq 1773 nt   +upstreamnt  +downstreamnt
atgagtgggggacgtcaacgttcaatgttcacggttcacccaaaccaacagtctgaatca
ggtatacacggtcaaacatatttattagaaacactgacaaactgtacagatcccttaaaa
gctattgaagaatttcaagtagacaatggaattcatttaccatcacttcgtcaaatgtta
cctttgctcgatcttcatggaattcggcggttagattttcataactctatactagaagca
ctacgcgacaaattagttgctcatattgaagaaattggtaaaaaagaaggacgtgaccga
gatcgtaagcttaaggatatgttggcaaagagttttccttcagttcatatcaaacaatta
agacccattattatggctattcttaaaaacatatctcatattgatgataaatatttaaat
gtattggttaaagacactgaactttataaagatactgatacagaagtgaagagacaaatt
tggaaggacaatcaatcactattggttaatgaagtgtctcctcttttaacacagtacata
agagagaaagaaaatattctttttgaccacaataatttaaccaatttattctttacacca
tcgccaaaattgagacgtcaaggagaagtggtacaaaaacttgcacatatgataggctct
agtataaaattatatgatatggttttgcaatttttgagaacattattcttgcgtactcat
aatgtacattattgtacattaagagctgaacttttaatggcattgcatgatctagaaatt
caagatattatatccattgatccatgtcataagttcacatggtgtctcgatgcatgtatt
cgtgaacgcaatgttgatgttaaacgttcccgtgagcttcaagggtttttagatagcatt
aaaagaggacatgaaacagtattgggagatttgtccatgacattatgtgatccgtacgcc
attaatttcttagcgacttcaactattagaatacttcatcatttaattaacaatgaaaat
ttaccaagggaaaatcatgtattagttttgttgttaaggatgttgtctcttggtttaagc
gcttgggttatgatagatacccaagattttaaggaaccaaaacttgacagtcaagtagtc
actaagtttatgcctgccttgatgtcactcatggtagatgatcaagttagatcattaaat
actaaaatgcctctggatgaaagggaatctgcaattaccattattgaacactctggacct
gttccagatgctgtgcaagcatatattcaagagagtagtgttgcttgtacggttgctatg
tattatacattacatgttgctaaagctaaagacaggttagcattaatgagaatattggga
tcattggccaattgtgatcatgaccgtgctttcgaggatccatttctccattttttggta
gcactattaatacagcaagtcgaagaatttgctgctgaagatttttgtactgtaatattt
gatgaattcttttgcactggattgagtagagaaaatgtagttagacatgtattaaaacta
gtgtggcatgtttatccaaagttaccaccaagtagattaagtacattaactaaagtttta
caaccaagttcaacacatgatgaggctgtacacaaactatatactgattttgtagaaaag
atatcgacagatacagaaccaccaccagaaccgccaagttttgattatttggaatcgcca
ttgatgagtgtgccaacaccgtcacattattaa

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