KEGG   Rhopalosiphum maidis (corn leaf aphid): 113561271
Entry
113561271         CDS       T06065                                 
Name
(RefSeq) LOW QUALITY PROTEIN: MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rmd03036]
    113561271
   03400 DNA repair and recombination proteins [BR:rmd03400]
    113561271
Chromosome and associated proteins [BR:rmd03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    113561271
DNA repair and recombination proteins [BR:rmd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     113561271
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT IBN_N HEAT_EF3_N
Other DBs
NCBI-GeneID: 113561271
NCBI-ProteinID: XP_026823394
LinkDB
Position
1:66896902..66905577
AA seq 990 aa
MTYVLNEMLDVVKNGNGIDSTCEVVSKEILDXRLTFLQFVESLEEILTSTDKDIRLNGVK
AFVTVLKKLPLDFFIPEELDYISQFLCERLIDHHSFVPIVLIGIEYTVQMKNISKQMIVR
YFNTIMPHFHCQSQLQNDRNTFYCILQYIFLNRLDDLRFMGPDFLYCVISSMDGERDPNN
LILLFRMLPQFLRNFPLGHLAEETFDVIACYFPIDFYETEESKITRDELATNLSRCLTCV
EEFADFCIPLALQKLEASLKVAKLDSLHLLKLCCENFDPIKIKFHIEEIWRILKMIIMTD
TDDSSDEVREAAIGVLTALLYSLTIIKGDNEQEQLSSFLDIILKSSNRFLLDTQATLFIP
SIKLLCSVGKTSNYACLKIANKVYLILLDKSDATRSEIVRIIEAMGLITNMCLEMCIDLS
SIPGLEKRWEEICCYFLLYAQNELPEIKISALKALKISTKILTNSQRQNYYCIIITLIKS
DITDSIRKETLSCFKEAAKYFKEEINREIIQFNLNILNESNDIILKSKWLNALCCLGNEE
YFFTLISDILSANLSVKQAETEMTLKCLRDLVKNIENINLLRHFALKDGLLNFILTTWIN
GIKNCTNFNIFRNEIVLEDVSFVINSVVKVINTSEQLQILNQFSQYFNEILNTKLNYKTL
SDIQQGIHSYMVILLESILNSLNKNIELKNVTLLIENCIELSTYSENSMCSLSASRLTAT
LINKYIDGDENNFIIDKLKFNLENYLNVSSMYINNVINQISWITKSLSIKGHGKMLQWID
WSLNLLADPLYGKIMTQCFKMLTQTDDGYLNKECFCSVKLLYKQRIFCYVIEPLISKYNT
MPEPIKENYLISILYQMDGNTYVTLSPYFSKILPLLLQLLSPEQDYVLQSLKTFCNLLES
KTPVLEDYLQSFVPKLLNLSQSSKFMNIRIVALQCLYNCCDYSLIKLLPLKRQVIFELTK
CLDDKKRLVRKEVVRTKSRWLSIDVLNDDD
NT seq 2973 nt   +upstreamnt  +downstreamnt
atgacgtatgtattgaacgaaatgttggatgttgtaaaaaatgggaatggtattgattct
acctgtgaagtagttagcaaagaaatattagatnaaagattaacttttcttcaatttgtt
gagagtttggaagaaattttgacttctacagataaagacattcgcctaaatggagttaag
gcatttgtaacagttttaaagaaattgcctttggatttttttataccagaagagttggat
tacataagtcaatttttgtgtgaacgtttgattgatcatcattcatttgtaccaattgtt
ttgattggaattgaatatactgtgcaaatgaaaaatattagcaaacaaatgattgtaagg
tattttaatacaatcatgcctcattttcattgtcaatcacaacttcaaaatgatcgaaat
acattctattgtatattacagtatatatttttgaatcgcttagatgatttacgttttatg
ggaccagatttcttatattgtgttatttcttcaatggatggtgaacgagatcctaataat
ttaatactgctttttagaatgttacctcaatttttaagaaattttccattaggtcattta
gcagaagaaacttttgatgttattgcctgttattttcctatagatttctatgaaacagaa
gaaagtaaaataactagagatgaattagcaactaacttatctcgatgtcttacttgtgta
gaagaatttgctgatttttgtattcctttggctttgcaaaaattagaagctagtttgaaa
gttgcaaaattagattcattgcacttattgaaattatgttgtgagaactttgatcctata
aaaataaaatttcacattgaagaaatatggcgtattttaaaaatgataataatgacagat
actgatgattcatcagatgaagttagggaagctgctattggtgttttaactgctttatta
tattcacttaccattattaaaggagacaatgaacaagaacaactatcaagtttcttagat
attattcttaaaagttctaatagatttttattggacactcaagcaactctatttatacct
tcaataaaactgctttgtagcgttggaaaaacttcaaattatgcttgtcttaagatagca
aataaagtgtatttaatcctacttgataaaagtgatgcaacacgatcagaaattgtaaga
atcatagaagctatgggattaattacaaatatgtgtttagaaatgtgtatcgatttatca
tctataccaggtctagaaaaaagatgggaagaaatatgttgttactttttactttatgct
caaaacgaattgccagaaataaaaatttctgctttgaaagcattaaaaatatcaactaaa
atactaactaattctcaacgtcagaattattactgtattataataacgttaataaaatct
gatataacagattctattagaaaagaaacattatcttgttttaaagaagcagcaaaatat
tttaaagaggaaataaatagagaaatcatacaatttaacttaaacattttaaatgagtct
aatgatattatattaaaatcaaagtggttaaatgcattatgttgtttgggaaatgaagaa
tatttttttacattaattagcgacattttaagtgctaatttgtctgtaaaacaagcagaa
actgagatgactcttaaatgcttaagagatcttgttaaaaatattgaaaatattaacttg
ttacgtcattttgctttaaaagacggactcttaaacttcattttaacaacttggatcaat
ggtatcaagaactgtactaatttcaatatttttagaaacgaaattgttttagaagatgtt
tcgtttgttattaattctgttgttaaagtgatcaataccagtgaacaacttcaaatactt
aatcaattcagccaatatttcaatgaaattttgaatacaaaattaaattataaaacactt
tctgatatacaacaaggcatacattcatatatggttattttattagaaagtattctaaat
tcattaaataaaaatatcgaactgaaaaatgtgactttattaattgaaaattgtattgaa
ttatcaacatattctgaaaattcaatgtgtagtttatctgcttcgcgattaacagcaaca
ttaattaataaatatattgatggtgatgaaaacaatttcataattgataaattgaaattc
aatttagaaaattatttaaatgtatcaagcatgtatatcaataatgttataaatcaaata
tcatggatcactaagtctttatctattaaaggtcatggaaaaatgctacaatggattgac
tggtcattgaatttattagcagatcctttgtatggaaaaattatgacacagtgttttaaa
atgttaacacaaacagatgatggctatctgaataaagagtgtttttgttcagttaaatta
ttatataagcaaagaatattctgttatgttattgaaccactcatatccaagtataataca
atgcctgaacctattaaagaaaattatctcattagtattttataccaaatggatggcaac
acatatgtgacactttcaccatatttttctaagatattacctctgttacttcaactttta
tctccagaacaagattatgttttacagtcgttgaaaactttttgtaatcttttagaatcc
aagactccagtattagaagattatttacaatcttttgttccaaaattgctaaatctatct
caaagttcaaagtttatgaatataagaatagtagctttacaatgtctttataattgctgt
gactattctttaattaaacttctacctttaaaaagacaggtgatttttgagttgacaaaa
tgcttagatgacaaaaaacgattggttcggaaagaagtagttagaacaaaatctcgatgg
ttgtctatagatgtattgaatgatgatgattaa

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