Rhopalosiphum maidis (corn leaf aphid): 113561278
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Entry
113561278 CDS
T06065
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113561278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113561278
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113561278
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
113561278
NCBI-ProteinID:
XP_026823403
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Position
1:complement(71209019..71215299)
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AA seq
548 aa
AA seq
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MASIKTEVSMSENGDDDQWLYGDSNSNLDPVVSLADDIKPAEPVGILEDEEARLMEFLAN
PGPGSIDVPPIVKELVSEDPNRPRSPETFLGVPGIQTEALITEDSFETNLLETATEVGIN
IPEKVSEENNEDRQISSEDSEEDSDDDIVVAAGNFTLSSMENNMASLSQQNNSSPSTAGI
NLKRNNLLTLTNIPGMSSGNKHQGKFNVEDFESMGTINGVPAHEYSIETTEEKPWLKPGA
DITDYFNYGFNENTWLAYCERQRKMRCNESLVGMSTLAMHNQQVSISTTNNNMIPTLDVK
SSTKFQAPNITPKENTIEVMTAERREYSRKHFSTPDLSVPPPIIPTNFDVPPPMIQNSIN
SIPPPGFGPPQINVPYEPEYYPHEPDPYYNAFEPTQDMQWNQTWTPNVKSIENIPTLSNG
DSYNKDLVRDKEYYSNRVKKEPEERGYERDRESRNRYRDRERERDRERDRDRDRERSRHR
ESDGVESPEASYKEEREYKHKSHRHRSRSRSHEKRSRKHKSRSRSGSRHRHKKKKKKSEK
NKEDDNSE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtataaagactgaggtttccatgtcggaaaacggagatgatgaccagtggttg
tatggggactcaaattctaatctagaccctgtcgtttcattagctgatgatattaaacca
gctgaaccagttggtattttagaagatgaggaagcacgtcttatggagttcttggcaaac
cctggaccaggaagtatagatgtcccacctattgtaaaagaattagttagcgaagatccc
aatcgacctcgaagtcctgaaacatttttaggggtaccaggaatccaaactgaggcactg
attacagaagattcatttgaaactaacctgttagaaactgcaactgaagtgggtattaat
attcctgaaaaagtatccgaagagaataatgaagatagacaaatatcatctgaagatagt
gaagaagatagtgatgatgacattgttgtggcagctggaaattttacattgtcttctatg
gaaaataatatggcctctctttcacaacaaaataattcaagcccatcaactgctggaata
aatttaaaacgaaataatttattaacattaacaaatattcctggaatgtcatctggaaat
aaacatcaaggaaaatttaatgttgaagattttgaaagtatgggcaccataaatggtgtt
cctgctcatgagtattctattgaaactactgaagaaaaaccatggttaaaaccaggtgca
gatatcacagattattttaattatgggtttaatgaaaacacatggttagcatattgtgaa
cgtcaaaggaaaatgcgatgtaatgagtcattagttggaatgtcaactttggcaatgcat
aatcaacaagtttctataagcactacaaataataatatgattccaactttggatgttaaa
tctagtacaaaatttcaagcaccaaatattacaccaaaggaaaacactattgaggttatg
acagctgagaggagagaatatagtcgtaaacatttttcaactcctgatttatcagtaccc
cctccaataattcctacaaattttgacgtaccaccaccaatgattcaaaattctataaat
tctataccacctcctggatttggtcctccacaaattaatgtgccttatgaaccagaatac
tatcctcacgaaccagatccatactacaatgcttttgaacctactcaagatatgcaatgg
aatcaaacttggaccccgaatgtaaaaagtatagagaacattccaactttgtcaaatgga
gattcatacaacaaagatttggtaagagataaagaatattattcaaatcgtgttaaaaaa
gaaccagaagaaagaggatatgaacgagatcgtgagagccgcaatcgataccgcgataga
gagagggagagggatcgtgaacgtgatagggacagagacagggaacgtagtagacataga
gaaagtgatggtgttgaaagtccagaagcaagttataaagaagagagagaatacaaacac
aagtctcatcgtcatcgctctcgaagtcgtagtcatgaaaaacgctctaggaaacacaag
tctcgtagtagaagtggatctagacatcgtcacaaaaagaagaaaaagaagtctgagaag
aacaaggaagatgataacagtgaataa
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