Rhopalosiphum maidis (corn leaf aphid): 113561289
Help
Entry
113561289 CDS
T06065
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
rmd
Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rmd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113561289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rmd03019
]
113561289
Messenger RNA biogenesis [BR:
rmd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113561289
mRNA degradation factors
5'-3' decay
Decapping complex
113561289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
113561289
NCBI-ProteinID:
XP_026823425
LinkDB
All DBs
Position
1:42766088..42770044
Genome browser
AA seq
423 aa
AA seq
DB search
MSYGDSEAKMNLSALQRVDPYVDSIVQTAGHVALYSFNAEANAWQKTNVEGTLHVYTRSA
EPLHSIMIMNRLNTNNLMEPIENGLDLQLQEPFLLYRNCGGSIYGIWFYDKEECAKISNI
LKSLIKNLIVKQNDKITKQETGSTKSIDLVSMLSRAQEDYRANKTSSKGSETPSKKVEEN
APPQCVMDFFAKAGSGKNFSEGLPSLSSYANTQSTQTPTLKTGSNEALLHKLMASPIHTV
EQIEMQQRSATPRTDILVTTHTEQIKTKSCSFNKIKPRSLINQLNQQDEDNTSHANRNGF
HRPKDNKDNSFSASLIEHFLNQSDISEKSSIAMGASMPLESQLESDELMPPTRFIMDEIE
DELVTSSVNAMSITEPKHLEPATNRLEPLTKNQLLQAFEYLLKNDPDFMVKIHEGYVKSL
LRN
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggcgattctgaagctaaaatgaatctttctgctttgcaaagagtagaccca
tatgttgatagtattgtacaaacggcaggacatgttgctttgtattcatttaatgcagaa
gcgaatgcatggcaaaaaaccaatgttgaagggactttacatgtgtatacacgatctgct
gaaccattacatagtattatgataatgaatagattgaatacaaacaatttgatggaacca
attgaaaatggcctagatcttcaacttcaagagccatttttactatacagaaactgtggt
ggttccatttatggtatttggttttatgacaaagaagaatgtgccaaaatttctaatata
ctgaaatcattgattaaaaacttgatagtaaaacaaaatgataaaattactaaacaagaa
actggttccaccaaaagtattgatctcgtttcaatgctcagtcgagcacaagaagattat
agggccaataagaccagttccaaaggatccgaaaccccatccaagaaagttgaagaaaat
gccccccctcaatgtgttatggatttttttgcaaaagcaggaagtgggaaaaatttctca
gaaggattaccatcattatcaagttatgcaaatacccaaagtactcaaactccaacttta
aaaacaggatctaacgaagctttgttgcacaagttgatggcaagtccaattcatacagta
gaacaaattgaaatgcaacaaagatcagcaacacctagaacagatatcttggtcacaact
catactgagcaaattaaaactaaatcatgttcattcaataaaataaagccccgaagttta
ataaatcaattaaatcaacaagatgaagataatacttcccatgctaatcgaaatggattt
catcggccaaaagataataaagataattcatttagtgcatcattgattgagcattttctt
aatcaaagtgatatatcggagaaatcaagtatagctatgggtgcatctatgccattagaa
tcacaacttgaatcagatgagttaatgccacctactaggttcataatggatgaaattgaa
gatgaactagttacctcttcagtaaatgcaatgtcaataacagaacctaaacacttggaa
ccagcaactaatagattggaaccattaacaaagaatcagttattacaagcttttgaatac
ttattaaaaaatgatccagattttatggttaaaatacatgaaggttatgtcaagtcatta
ttacggaattaa
DBGET
integrated database retrieval system