KEGG   Rhopalosiphum maidis (corn leaf aphid): 114253675
Entry
114253675         CDS       T06065                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA ligase 3-like
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
rmd  Rhopalosiphum maidis (corn leaf aphid)
Pathway
rmd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rmd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    114253675
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rmd03400]
    114253675
Enzymes [BR:rmd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     114253675
DNA repair and recombination proteins [BR:rmd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     114253675
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP DNA_ligase_A_C RNA_ligase ACDC
Other DBs
NCBI-GeneID: 114253675
NCBI-ProteinID: XP_028044458
LinkDB
Position
3:complement(39563519..39600749)
AA seq 751 aa
MSILDNMEGMSDDKLFVAEKSKSNRAKCKKCKEVLNQGTLRIAKVMANPFGDGKMMAWHH
PQCLVTVFSKQRASTAKITCVDDIGGWDGLSMEHQNEIFTTFPDIPKEKLKTHDDDEPNK
KDTTKKNKSKTKPSPSLPQTQDYYFKDFRKLCLSLSQENSHLQKTSIFKEFIHSILSKEQ
SNETRAESMFLWCKMLLPNSEKRIYNLHSKQLIKLFSQLFKQNVNLMLEDLEKGDVAETI
RIFFEKSNNVDAKPASKSTLTLAKVNSFLDKLSMETTEIAQMALFKSIATLCTGNDLKMI
IRLVMHDLRINCGPKFILGALHSDAYEAYQTSHDLKSVVQNACSCDLSKVASNGKMNIKL
SLLTPILPMLADPCKNLDDFFKKCPNGVYSEIKYDGERVQLHKSEKEFKFFSRSLKPVLG
HKVDLFKQYIPKAFQHGKEIILDCEVLMYDHKTNKPLPFGTLGIHKKSKFEDANPCLFVF
DCMYYNGESLLDRSIVERKKILIQNMTPIKGHIMFSEVKELHNTKELKLMVEYVLKQGLE
GLVLKDLTGIYEPGKRHWKKIKKDYLFDGSIADSADLVVLGAWFGTGNKGGMMSIFLMGC
YNETKKKWCTVTKVHSGHDDKTLERLQDELKMIKISKDLEKVPEWLKCNRNMIPDFVAED
PKKMPVWEISGAEFSQAEVHTANGISIRFPRVTKIRNDKDWKTATSLSELQKLYEASKET
XNLNIFSYLNPEKNTSSDNESQASPEKRKKK
NT seq 2256 nt   +upstreamnt  +downstreamnt
atgagtatacttgacaatatggaaggaatgtccgatgacaaacttttcgttgccgaaaaa
tctaagagcaacagggcaaaatgtaaaaagtgtaaagaagttttaaatcaaggaacgttg
aggatcgccaaagttatggcaaatccatttggtgatggaaaaatgatggcttggcatcat
ccacagtgtttagtaactgtattttctaagcagagagcatcgacggcgaaaattacctgt
gtggacgatattggtggatgggatggactgtctatggaacaccaaaatgaaatatttacg
acgttccctgatattcctaaggagaaacttaaaacacacgatgacgacgaacctaacaaa
aaagacacaacaaaaaaaaataaatcgaaaacaaaaccttcgccgtcgctgccacaaacg
caagattattattttaaagactttcgaaaactgtgtttgagtctctcgcaggaaaatagt
catcttcaaaaaacgtcgatttttaaagaatttattcacagtattttatctaaagaacag
tcaaatgaaacccgtgcagaaagtatgtttttatggtgtaaaatgttgttacccaattca
gaaaaaagaatttacaatctacattcaaaacaactgattaaattattcagtcaattgttc
aaacaaaatgtaaacttaatgctagaagatttggaaaagggggatgttgctgaaacgata
agaatattttttgaaaaaagtaataatgttgatgcgaaaccagcatcaaaatcaacttta
acattagctaaagtaaacagttttctcgataaattatcaatggaaactactgaaattgca
caaatggcgctttttaaatcaatcgcaacgctatgtactgggaatgatttgaaaatgata
attcgactggttatgcatgatctcagaattaattgtggaccaaaatttattttaggggca
cttcattcagatgcatatgaagcataccaaacatcacatgatttaaaatctgttgtacaa
aatgcatgttcatgtgatttatctaaggtagctagtaatggaaaaatgaacattaaatta
tctttgttaacaccgattttgccaatgttggctgatccatgcaaaaatttggatgatttt
tttaaaaagtgtcctaatggtgtatactcagaaattaaatatgatggtgaacgtgttcaa
ctgcataaaagtgaaaaagaatttaaatttttttcaagaagtttaaaaccagtcttggga
cataaagttgatttatttaaacagtatattcctaaagcttttcagcatggaaaagagatt
attttagattgtgaagtattaatgtatgatcataaaactaataaacctttaccatttggc
accttaggaattcataagaaaagtaaatttgaagacgctaatccttgtctgtttgttttt
gactgcatgtattacaatggcgaatcattgttagacagatcaattgtagaacgaaaaaaa
attctgatacagaatatgactccaatcaaaggacatatcatgttttcagaagttaaagag
ttgcacaatactaaagaacttaagttaatggtagaatatgtattgaaacaaggtctagag
ggattagtattaaaggacctaacaggaatttatgagcctggaaagcgacattggaaaaaa
attaaaaaagactacttatttgatggatcaattgccgattctgcagatcttgtagttctt
ggtgcttggtttggtactggaaataaaggtggtatgatgtccatatttttaatgggttgc
tataatgaaactaaaaagaaatggtgtacggtgacaaaagtacacagtggtcacgatgat
aaaacactagaaagattacaagatgaattaaaaatgatcaaaattagtaaagatcttgaa
aaagttccagaatggttaaaatgtaatagaaatatgattcctgattttgtagctgaagat
cctaaaaaaatgccagtttgggaaatttctggagcagaattttctcaagctgaagtgcac
acggctaatggtatatcaattagattccctagagtgactaaaattagaaatgataaagat
tggaaaactgctacatcattaagtgaattgcaaaaattatatgaagcatccaaagaaact
ngaaatttaaatattttttcgtacctaaatccagaaaagaatactagttctgataatgaa
tcacaggcatcaccagagaaacgaaaaaaaaaatga

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