Cupriavidus metallidurans: Rmet_0149
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Entry
Rmet_0149 CDS
T00351
Symbol
xthA1
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rmet_0149 (xthA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_0149 (xthA1)
Enzymes [BR:
rme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rmet_0149 (xthA1)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rmet_0149 (xthA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABF07035
UniProt:
Q1LS41
LinkDB
All DBs
Position
complement(153809..154585)
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AA seq
258 aa
AA seq
DB search
MLRIISANLNGIRSASKKGFFEWMGKQEADMVCVQELKAQEADMTEAFLAPHGYHGYFHY
AEKKGYSGVGLYTRHKPERVIIGFGNTEFDAEGRYVEVQYPHLAVISVYVPSGSSSEERQ
QAKFRFMEAFLPHLLELKASGREIVLCGDVNIAHKEIDIKNWKGNLKNSGFLPEERAWIG
ELFDNHGYVDVFRQLDPRPEQYTWWSNRGQAYAKNVGWRIDYHLTTAKIAATAKATSIYK
DEKFSDHAPLSIDYDFPL
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgttacggattatcagcgccaacctcaacggcatccgctccgcctccaagaaaggcttc
ttcgagtggatgggcaagcaggaagcggacatggtctgcgttcaggaactcaaggcccag
gaagccgacatgaccgaggcgttcctggcgccacacggctatcacggctacttccactat
gccgagaaaaaaggctacagcggcgtgggcctctatacccgccacaagccggagcgcgtg
atcatcggcttcggcaatacggagttcgatgctgagggtcgctacgtcgaagtgcagtat
ccgcacctcgccgtgatctcggtctacgtgccttccggctcaagctcggaggagcgccag
caggccaagttccgctttatggaagccttcctgccgcacctgctggagctgaaagccagc
ggccgcgagatcgtgctgtgcggtgacgtgaacatcgcccacaaggaaatcgacatcaag
aactggaagggcaacctgaaaaactccggtttcctgcccgaagagcgcgcctggatcggc
gaactgttcgacaaccacggctatgtcgacgtattccgccagctggacccgcgccccgaa
cagtacacatggtggagcaaccgcggtcaggcgtacgcgaagaacgtggggtggcgcatc
gattaccacctgaccacggcgaaaatcgcggctaccgccaaggctacgtcgatctacaag
gacgagaagttcagcgaccacgccccgctgtcgatcgattacgattttccgttgtga
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