Cupriavidus metallidurans: Rmet_0153
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Entry
Rmet_0153 CDS
T00351
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00300
Lysine biosynthesis
rme00470
D-Amino acid metabolism
rme01100
Metabolic pathways
rme01110
Biosynthesis of secondary metabolites
rme01120
Microbial metabolism in diverse environments
rme01230
Biosynthesis of amino acids
Module
rme_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rmet_0153 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rmet_0153 (dapF)
Enzymes [BR:
rme01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Rmet_0153 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
DUF4514
Motif
Other DBs
NCBI-ProteinID:
ABF07039
UniProt:
Q1LS37
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All DBs
Position
complement(157559..158425)
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AA seq
288 aa
AA seq
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MKLQFTKMHGAGNDFIVLDGIHQKLDLTDAQWRALANRHFGIGADQILIVEKSSRDDVDF
RYRIVNADGGEVEHCGNGARCFVRFVTDRGMTDKQSVRVEVMNGVITLKLQDDGQVTVDM
GEPELTPARVPFIADGLPTRAEAQDTLYGLEVNGRTEWISPVSMGNPHAVQIVDDVEQFP
VLQDGPVIEHHKSFPNRVNAGFMQIVDRNTVRLRVFERGAGETLACGTGACAAVVAGIRR
GLLDSPVKVHTHGGDLTIAWQGAGQPVQMTGPATTVFEGTIDLSTLPA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccagttcaccaagatgcacggcgccggcaacgatttcatcgtgctggacggc
attcaccagaagctcgacctgaccgacgcgcaatggcgcgcgctggcgaatcgccatttc
ggcatcggcgccgaccagatcctgatcgttgaaaaatcctcgcgcgacgatgtggatttc
cgctaccggatcgtcaacgcggacggcggcgaagtcgaacactgcggcaacggcgcccgt
tgcttcgtccgcttcgtcacggatcgtggcatgaccgacaagcagtcggtccgcgtggaa
gtcatgaacggcgtcatcacgctgaagctgcaggacgacggtcaggtgaccgtggacatg
ggtgagcccgaactcacgcccgcccgcgtgccattcatcgccgacggcctgccgacgcgc
gccgaagcccaggacacgctctatggtctcgaagtcaacggccgcaccgagtggatctcg
cccgtgtcgatgggcaatccgcacgcggtgcagatcgtggacgacgtagagcaattcccg
gtgcttcaggacggcccggtcatcgagcaccacaagtcgttcccgaaccgggtcaatgcc
ggattcatgcagatcgtcgaccgcaatacggtgcggctgcgcgtgttcgaacgcggcgcg
ggcgaaacgctggcgtgcggcacgggcgcctgcgcggccgtggtggctggcatccgccgc
ggcttgctggactctccggtcaaggtgcacacccacggcggcgacctgaccatcgcgtgg
caaggcgctggccagcccgtgcagatgacgggccccgcgacgaccgtgttcgaaggcact
attgacctctccacgctgcctgcctga
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