Cupriavidus metallidurans: Rmet_0519
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Entry
Rmet_0519 CDS
T00351
Symbol
xerD
Name
(GenBank) tyrosine-based site-specific recombinase
KO
K04763
integrase/recombinase XerD
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rme03036
]
Rmet_0519 (xerD)
Chromosome and associated proteins [BR:
rme03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Rmet_0519 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
DUF3435
Phage_int_SAM_4
Integrase_1
Motif
Other DBs
NCBI-ProteinID:
ABF07405
UniProt:
Q1LR21
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All DBs
Position
complement(555094..556002)
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AA seq
302 aa
AA seq
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MTAALDGDLSLVDRFCDALWLEDGLARNTIDAYRRDLAMLARWLHESGTTALLGVDDTAL
SGYFAARHLETRASSANRRLTVFRRFYQWALREHMIEADPCLLLRPAKQPPRFPKTLSEA
QVVALLEAPDIETPLGLRDRTMLELMYASGLRVSELTNMKTIEVGLNEGVARVVGGKGNK
ERLVPFGAQAGDWLHRYLSDARPTLLAGRACDELFVTQRGEGMTRQTFWHLIKKHARDAG
IHAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLRELHLHHHP
RG
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggcactcgatggcgacctgtcgctggtcgaccggttctgcgatgcgttgtgg
ctcgaagatggcctggcacgcaatacgatcgacgcctaccggcgcgacctggccatgctg
gcgcgctggctgcacgagtccggcaccacggcgttactgggcgtcgacgacaccgcgctt
tccggatacttcgccgcgcgtcacctggagacgcgcgcttcctcggccaatcgccgcctg
actgtgttccgccgtttctatcagtgggccctgcgcgagcacatgatcgaggccgacccc
tgcctgctgctgcgccccgccaagcagccaccccggttcccgaagacgctgtccgaggca
caggtggtggcgctgctggaagcccccgatatcgaaacgccgctgggcctgcgggaccgc
accatgctcgaactgatgtatgcgagcgggctgcgcgtgtccgagctcacgaacatgaag
accatcgaagtcggcctgaatgaaggcgtggcgcgcgtggttggcggcaagggcaacaag
gagcggctggtgccattcggcgcgcaggccggcgactggctgcatcgctacctgtccgat
gcgcgccccacgttgctggcgggccgcgcgtgcgacgaactcttcgtcacgcagcgcggc
gagggcatgacgcgccagacgttctggcacctgatcaagaaacacgcgcgtgacgcgggc
attcacgccccgctctccccgcatacgctccggcacgcctttgccacgcacctgcttaat
cacggcgccgacctgcgcgtggtgcagctgctgctggggcacgccgatatctccaccacg
cagatctacacgcacgtcgcgcgcgagcgcctgcgcgaactgcacctgcatcaccatccg
cgcggctga
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