Cupriavidus metallidurans: Rmet_0616
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Entry
Rmet_0616 CDS
T00351
Symbol
groL
Name
(GenBank) Cpn60 chaperonin GroEL, large subunit of GroESL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rmet_0616 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rme03019
]
Rmet_0616 (groL)
03110 Chaperones and folding catalysts [BR:
rme03110
]
Rmet_0616 (groL)
03029 Mitochondrial biogenesis [BR:
rme03029
]
Rmet_0616 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rme04147
]
Rmet_0616 (groL)
Enzymes [BR:
rme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Rmet_0616 (groL)
Messenger RNA biogenesis [BR:
rme03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Rmet_0616 (groL)
Chaperones and folding catalysts [BR:
rme03110
]
Heat shock proteins
HSP60 / Chaperonin
Rmet_0616 (groL)
Mitochondrial biogenesis [BR:
rme03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Rmet_0616 (groL)
Exosome [BR:
rme04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rmet_0616 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Rmet_0616 (groL)
Exosomal proteins of breast cancer cells
Rmet_0616 (groL)
Exosomal proteins of colorectal cancer cells
Rmet_0616 (groL)
Exosomal proteins of bladder cancer cells
Rmet_0616 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABF07502
UniProt:
Q1LQS4
LinkDB
All DBs
Position
674944..676587
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKFVAAGMNPMDLKRGI
DKAVGAAVEELKKLSKPTTTSKEIAQVGAISANSDASIGERIAEAMDKVGKEGVITVEDG
KSLADELEVVEGMQFDRGYLSPYFINNPEKQVVQLDSPFVLLFDKKVSNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEIGLTLEKATLQDLGQAKRIEIGKENTIIIDGAGDASAIEGRVKQIRAQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RARAAIAGLHGENPDQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGNYGYNA
ASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAESPKEESAPAMPGGMGGM
GGMEGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtagtgttcggcgacgccgcccgtgccaagatggtcgaaggcgtg
aacatcctcgccaacgcagtgaaggtgaccctgggcccgaagggccgcaacgtggtgctg
gagcgcagcttcggcggcccgaccgtgaccaaggacggcgtgtccgtggccaaggaaatc
gaactgaaggacaagctgcagaacatgggcgcgcagatggtcaaggaagtggcttccaag
accagcgacaacgccggtgacggtaccaccaccgcaaccgtgctggcccagtcgatcgtg
cgcgaaggcatgaagttcgttgccgctggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgttggcgccgccgtcgaagagctgaagaagctgagcaagccgacgaccacc
agcaaggaaatcgcccaggttggcgcgatctcggccaacagcgacgcctcgatcggcgag
cgcattgccgaagccatggacaaggttggcaaggaaggcgtgatcaccgtcgaagacggc
aagtcgctggccgacgagctggaagtcgtggaaggtatgcagttcgaccgtggctacctg
tcgccgtacttcatcaacaacccggagaagcaggttgttcagctggacagcccgttcgtt
ctgctgttcgacaagaaggtctcgaacattcgtgacctgctgccggtgctggagcaagtg
gccaaggctggccgcccgctgctgatcatcgctgaagacgtggaaggcgaagccctggcc
acgctggtggtgaacaacatccgtggcatcctgaagaccgccgccgtgaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgaccggcggtaccgtg
atcgccgaggaaatcggtctgacgctggaaaaggccacgctgcaggacctgggccaagcc
aagcgcatcgagatcggcaaggaaaacactatcatcatcgacggcgccggcgacgcatcg
gcgatcgaaggccgcgtgaagcaaatccgcgcccagatcgaagaagcgacctcggactac
gaccgtgagaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatcaag
gttggcgctgccaccgaagtcgaaatgaaggaaaagaaggcacgcgtggaagatgcactg
cacgctacccgtgctgccgtggaagaaggcatcgtcccgggcggtggtgtggcgctgctg
cgtgctcgtgctgcgatcgctggcctgcacggcgagaaccccgaccagaacgccggtatc
aagatcgtgctgcgcgccatggaagagccgctgcgccagatcgtgctgaacgctggtgaa
gaagcttcggttgtggtggccaaggtcatcgaaggtaagggtaactacggttacaacgcg
gcttcgggcgagtacggcgacctggtggaaatgggcgtgctggatccgaccaaggtgacc
cgcaccgcgctgcagaacgccgcttcggtggcttcgctgatgctgaccaccgactgcgcc
gtggccgaatcgccgaaggaagagtcggctccggcaatgccgggcggcatgggcggcatg
ggcggcatggaaggcatgatgtaa
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