KEGG   Cupriavidus metallidurans: Rmet_0618
Entry
Rmet_0618         CDS       T00351                                 
Symbol
clpB
Name
(GenBank) Chaperone clpB (Heat-shock protein F84.1)
  KO
K11907  type VI secretion system protein VasG
Organism
rme  Cupriavidus metallidurans
Pathway
rme03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rme00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Rmet_0618 (clpB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rme02044]
    Rmet_0618 (clpB)
Secretion system [BR:rme02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Rmet_0618 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 nSTAND3 AAA_7 NACHT Zeta_toxin Clp_N Sigma54_activat AAA_24 AAA_14 IstB_IS21 bpMoxR AAA_33 AAA_18 Acetyltransf_6 AAA_25 SRP54 AAA_30 DUF815 HARE-HTH T2SSE V-SNARE AAA_6
Other DBs
NCBI-ProteinID: ABF07504
UniProt: Q1LQS2
LinkDB
Position
complement(677318..679999)
AA seq 893 aa
MTTRDYSPFLRRLNDHCARALADAASLCETRAHRDIEVEHWLIKLMEQGDGDLLAILRRY
ELDVDGIWNGLLAAVDHLPHDLRGRPGLSQRLGQWLEAAWMRASLESTAPGVDRSIRSAH
LLAALAETPHLLRAPDAWPLLSVSAAQIERLMPELDEISVEATSPITPSQGPATIATRRP
AGQPDNSALSRFTTDVTQKARDGKIDPVFGRDVEIRQMVDILARRRKNNPILVGEPGVGK
TALVEGLALKIAEEDVPTAIRDVTVLTLDMGLLQAGAGVKGEFEQRLKNVIEAVQQSPTP
ILLFIDEAHTLIGAGNTAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERR
FQMVKVDEPDDENACLMLRGLKDRYAQHHNVHITDAAVAAAVRLSRRYLTGRQLPDKAVD
LIDTAAARVRMSQEARPVAICTLEAERAALGVEYLALQQDQGATGEDKRNRLSAIETRLR
ELAIELGQLEFELAAQKDAADKLMVLRAQWQAATDASERHDLASSIQAAHQVLAAHGQAT
LLHAEVAETVVAQVIADWTGVPVDNLLSNELATLLELEARLGRVVVGQDEALAALGKSLR
ASKAGLKSEEAPLGVFLLVGPSGVGKTETARALADLMFGGERSLITINLSEYQEAHTVSQ
LKGSPPGYVGYGEGGILTEAVRQRPYSVVLLDEVEKAHRDVLNLFYQVFDRGFMRDGEGR
VIDFRNTVILMTSNLGSEQILAATDATTEAGVEIPASALMETIRPLLIDRFQPALLARFQ
TIVYRPLAAEAMATIVGMKLAKVAERIERRFDVPLRCDDALVAELVRACLLPDSGARNID
SLLDQQILPVLSRELLIRMANRQVPASIRLSFSEEDGIGLDFDDAATTAEEYA
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgaccacccgcgattactctccctttctgcgacgcctgaacgaccactgcgcccgtgct
ctggcggatgcagccagtctttgcgaaacccgcgcgcaccgtgacatcgaggtggagcac
tggctgatcaaactgatggaacagggtgacggcgacctgcttgccatcctgcgtcgctac
gagctggatgtcgatgggatctggaacggactgctggctgcggtcgaccacctgccgcat
gacctccggggcaggccggggctatcgcagcgcctgggccagtggctggaggcagcgtgg
atgcgcgcctcgctcgaatccacggccccgggcgtagacagatcgattcgttcggcccac
ttgctggcggcactggcggagacgccgcacctgttgcgcgccccggatgcctggccgctg
ctgagcgtgtctgccgcgcagattgagcggctgatgcctgaactggacgagatatctgtc
gaggcaacatcgccgatcacgcctagccagggaccggcgaccatcgctacaaggcgccct
gccggccagcccgacaactctgccctctctcgtttcaccacggacgtcacgcaaaaggcg
cgcgatggcaagatcgaccctgtgtttggccgcgacgtcgagatccggcagatggtcgat
atcctcgcccggcgccgtaagaacaatccgattctggtcggcgaaccgggggtcggcaaa
actgcgctcgtcgaagggctggcgctcaagatcgccgaagaggatgtgcccacggccatc
cgggacgtgaccgtactcaccttggatatgggcctcctgcaagccggtgcgggcgtcaag
ggcgagttcgagcagcgcctcaagaatgtcattgaagccgtccagcagtcgccgacgccc
atcctgctcttcatcgacgaggcgcacaccctgattggcgccggcaacacggccggtggc
gccgatgccgccaacctgctcaagcctgcactggcacggggcgaactacgcacgatcgcg
gcaaccacctggtccgaatacaagcagtacttcgagcgcgacgcggcgctggagcgccgc
ttccagatggtcaaggtcgatgagcccgatgatgagaacgcctgcctgatgttgcgcggg
ctcaaggatcggtatgcacagcaccacaacgtccacatcaccgatgccgccgtcgcagcc
gccgtccgtctttcacgtcgctatctgactgggcgccaactgcccgacaaggctgtcgac
ctgatcgacacggcggctgcgcgggtgcgcatgagtcaggaggccaggcccgtggcgatc
tgcacccttgaagccgaacgcgcggcgctgggggtcgagtacttggcgctgcagcaggat
cagggtgccaccggcgaggacaagcgcaatcgtctgtcggcgatcgagacgcgcctacgc
gaacttgccatcgaactcggacagcttgagttcgaattagcggcgcagaaggacgctgcc
gacaagctgatggtgctgcgtgcccaatggcaggccgctaccgacgcttccgagcgccac
gatctcgcgtcctccattcaggctgcccaccaggtcctggccgcgcacggtcaggcgaca
cttctacatgcagaagttgctgagaccgtcgtggcgcaggtaattgccgactggaccggc
gtgccggttgacaacctgttgtcgaatgaactggccaccctgctggagctggaggcacgc
ctcggacgggtcgtggtcgggcaggacgaggcgctggccgcgctcggcaaaagcctgcgc
gcctccaaggcgggcttgaaatccgaggaggcaccgctgggcgtctttctcctcgtgggc
ccttccggggtcggcaagaccgaaacggcacgggcactggccgatctcatgttcggcggt
gaacgctcgctcatcacgatcaacctgtcggagtatcaggaagcccacaccgtatcgcaa
ttgaagggatcgccgccgggctatgtcggctatggcgagggcggcatcctgactgaggct
gtccgtcagcgcccctacagcgtggtcctcctggatgaggtggaaaaggcccatcgggac
gtgctcaacctgttctaccaggtcttcgatcgcggcttcatgcgcgatggcgaaggccgg
gtcattgatttccgcaacaccgtcatcctgatgacatcgaatctcggcagcgagcaaatc
ctggcggccaccgacgccacaacggaagctggtgtggaaatccccgccagcgcgctgatg
gagaccatccggccgctcctgatcgaccgcttccaacccgcgctgctggcgcgcttccag
accattgtgtaccggccgctcgccgcggaggccatggccacgatcgtagggatgaagctg
gccaaggtggccgagcgcatcgaacgccggttcgacgtgccgctgcgctgcgacgacgcc
ctggtggccgaactggtgcgcgcctgcctgctgcctgactctggcgcacgcaatatcgac
agcctgctcgaccagcagatcttgcccgtgctgtcgcgtgaattgctgatacgcatggcc
aacaggcaggtacctgcgtctatccggctctcgttctccgaggaggacggcattgggctg
gacttcgatgatgcggcaaccaccgcggaggaatacgcgtga

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