Cupriavidus metallidurans: Rmet_0713
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Entry
Rmet_0713 CDS
T00351
Symbol
gyrA
Name
(GenBank) DNA gyrase (type II topoisomerase), subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rme03032
]
Rmet_0713 (gyrA)
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_0713 (gyrA)
Enzymes [BR:
rme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rmet_0713 (gyrA)
DNA replication proteins [BR:
rme03032
]
Prokaryotic type
DNA Topoisomerases
Rmet_0713 (gyrA)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rmet_0713 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABF07599
UniProt:
Q1LQH7
LinkDB
All DBs
Position
788534..791227
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AA seq
897 aa
AA seq
DB search
MDQFAKETLPVSLEEEMRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHEMLQDIDKETVDFEPNYDGSEKEPGILPARIPNLLINGSSGIAVGMAT
NIPPHNLNEVVDACLHLLRNPDATVDELIELVPAPDFPTAGIIYGIQGVREGYRTGRGRV
VMRARTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKKVEGISDIRDESDKSG
MRVVIELKRNEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLDAFLSHRRE
VVTRRTVFELRKARERGHVLEGLAVALANIDEFIAIIKAAPTPPIAKQELMSKPWDSGLV
REMLARAESDTAGGRASYRPDGLPAVFGMQPDGLYRLSDGQAQEILQMRLQRLTGLEQDK
IVQEYREVMGLIADLLDILARPERITTIITEELGAIRAEFGDERRSQIELNATELDTEDL
ITPQDMVVTLSHSGYMKSQPISEYRAQKRGGRGKLATATKEDDWIDTLFVANTHDYILCF
SNRGRLYWLKVYEVPQGSRNSRGRPIVNMFPLADGEKINVILPVRQFDAEHFIFMATARG
TVKKTVLTDFSNPRKAGIIAVDLDEGDFLIGAAVTDGQHDVMLFSDAGKAVRFDENDVRP
MGRQARGVRGMNLDEGQAVIAMLVAPAESAETESSVAEGDVSPVGSVLTATENGYGKRTP
ISEYTRHGRGTKGMIAIQTSERNGRVVAAALVSPEDEIMLITTGGVLIRTRVAEIREMGR
ATQGVTLINVDEGTKLSGLQRIVESDADNGSGAEEGEAADDAAGATDAGATDAGANS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagaaacccttccggtctcactggaagaggaaatgcgccgctca
tacctggattacgcaatgagcgtaatcgtggggcgcgcgcttcccgacgttcgggacggc
ctgaaaccggtacaccggcgcgtgctgtttgcgatgcatgagctcaacaacgactggaac
cggccgtacaagaagtcggcccgtatcgtcggcgatgtgattggtaaatatcacccgcac
ggcgataccgcggtgtacgacacgatcgtgcgcatggcgcagaatttctccctgcgttac
atgctggtcgacggtcagggcaacttcggttcggtggacggagataacgcggcggcaatg
cgttataccgaaatccgcctgtcgaagattgcccatgaaatgcttcaggatatcgacaag
gaaactgtcgatttcgaaccgaactatgacggttcggagaaagagcctggcattttgccg
gcacgtattccgaatcttctgatcaatggttcgtcgggtattgcggtcggcatggccacc
aatattccgccgcataacctcaatgaggttgtcgatgcctgtctgcatctgctgcgtaat
cccgatgccaccgtcgatgaactgatcgaattggtgccggcgcccgattttccgaccgcc
ggcattatctatggcatccagggcgtgcgcgaaggctaccgcaccggccgtggccgtgtg
gtcatgcgcgcccgcacgcacttcgaggacatcgaccggggccagcgccaggcgatcatc
gttgacgagctgccgtaccaggtgaacaagcggacactgctcgagcgcattgccgagttg
gtgaccgagaagaaggtcgaaggtatttcggacatccgcgacgaatctgacaagtcaggt
atgcgcgtggtgatcgaactcaagcgcaatgaggtgcccgaggttgttctgaacaaccta
tataagaacacccagctccaggacaccttcggcatgaacatggtggccctggtcgatggt
cagccgcgcctgctgaacctgcgccagatgctggatgcgttcctgtcgcaccggcgcgag
gtggtcacccgccgtaccgtgttcgagctgcgcaaggcgcgcgagcgcggtcatgtgctg
gaaggcctggccgtggcgctggccaacatcgacgagttcatcgcgatcatcaaggctgcg
ccgacgccgccgatcgcgaagcaggagctgatgtcgaagccctgggattcgggtctggtg
cgcgaaatgctggcacgtgccgaaagcgacactgcgggcggccgcgcatcgtaccgcccg
gatggtctgccggctgtgttcggcatgcagccggatggcctgtatcgactgtccgacggt
caggctcaggaaatcctgcaaatgcgcctgcaacgcctcacggggcttgagcaggacaag
attgtccaggagtaccgcgaggtcatgggcctgatcgccgatctgctcgacatcctggcc
cgcccggagcgcatcacgacgatcatcaccgaagagcttggagcgatccgggccgaattc
ggtgacgagcgccgttcgcagatcgagctgaacgcgaccgaactcgataccgaggacctg
atcacgccgcaggacatggtcgtgacgctgtcgcactccggctatatgaagagccagccg
atttccgagtaccgcgcgcagaagcgtggtgggcgcggcaagctggcgacggcgacgaag
gaagacgactggatcgacacgctgttcgtcgcaaacacgcacgactacatcctgtgcttc
tcgaaccgtggccggctgtactggctgaaggtctatgaggtgccacagggctcgcgcaat
tcgcgtggacggccgatcgtgaacatgttcccgctggccgacggcgagaagatcaacgtc
atcctgccggtgcgccagttcgatgccgagcacttcatcttcatggccacggcgcgtggc
acggtgaagaagaccgtgctgactgatttctcgaatccgcgcaaggcgggcatcatcgcc
gtggatctcgatgagggcgacttcctgatcggcgccgccgtgaccgacggccagcacgac
gtcatgctgttctccgacgccggcaaggccgtgcgattcgatgagaacgacgtgcgtccg
atgggccggcaggcacgcggtgtccgcggcatgaacctcgatgaaggtcaggccgtgatc
gccatgctggttgcgccggccgaatccgcggaaacggaatcgtcggtggcagagggagac
gtgtctccagtgggcagcgtcctgaccgcaaccgagaatggttacggcaagcgcactccg
atctccgaatacactcgacacggacgtggcaccaagggcatgattgcgatccagacgagc
gagcgcaatggccgcgtggtggctgcggcgctggtttcgcccgaagatgaaatcatgctg
atcacgaccggcggcgtgctgattcgcacccgcgtggccgaaatccgcgagatgggtcgt
gccacgcagggtgtgacgttgatcaacgtcgacgagggcaccaagctgtcgggtctgcag
cgcatcgtggaaagcgacgcggacaacggttcgggggcagaggaaggcgaagcagccgat
gatgccgcgggcgccaccgatgccggagccactgacgcgggtgcgaattcgtaa
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