Cupriavidus metallidurans: Rmet_1189
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Entry
Rmet_1189 CDS
T00351
Symbol
xthA2
Name
(GenBank) exodeoxyribonuclease III (xth)
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rmet_1189 (xthA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_1189 (xthA2)
Enzymes [BR:
rme01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rmet_1189 (xthA2)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rmet_1189 (xthA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ABF08075
UniProt:
Q1LP51
LinkDB
All DBs
Position
complement(1303315..1304112)
Genome browser
AA seq
265 aa
AA seq
DB search
MRIASWNVNSLKVRLPQVLQWLGAQDAAGTPIDALCLQELKLPDDKYPLAELQAAGFHSI
FTGQKTYNGVAILARNAAMPVPTDVVRNIPGYEDAQQRVIAGTYGDVRLISAYFPNGQAL
DSDKFVYKLDWLKAMIEWLRAEMTRYPKLALLGDFNIAPEDRDVHDPAKWEGQNLVSPQE
RDAFQTLIGLGLVDSFRMFEQPEKMFSWWDYRMMGFRRNAGLRIDHILLSADLARQCATC
VIDKEPRRWEQPSDHTPVVATLTLG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgcaagctggaacgtcaactccctcaaggtacgtctgccgcaggtgctgcaa
tggctaggcgcgcaggatgccgcgggcacgccgatcgatgcgctgtgcctgcaggaacta
aagctgcccgacgacaagtacccgctggccgaactccaagcggccggcttccatagcatc
ttcacaggtcagaaaacctacaacggtgtggcgatcctggcacgcaacgcggccatgccc
gtgccgactgacgtggtgcgcaacattcccggctatgaggatgcgcagcaacgcgtgatc
gccggcacgtacggcgacgtacgtctgattagcgcgtacttcccgaatggccaggcgctg
gactcggacaagttcgtctacaagctcgactggctcaaggccatgatcgagtggctgcgc
gccgaaatgacccggtatccgaaactcgcgctgctgggagacttcaacatcgccccggaa
gaccgcgacgtccacgacccggccaagtgggagggccagaacctggtctcgccgcaggag
cgcgacgcgttccagacattgatcggcctgggtctggttgactccttccgcatgttcgaa
cagcccgagaaaatgttctcgtggtgggattaccgaatgatgggtttccgccgcaatgcc
gggttgcgtatcgaccatatcctgctttcggccgacctggcgcggcagtgcgcgacgtgt
gtcatcgacaaggagccgcgccgctgggagcagccgtctgaccacacccctgtcgtggcc
acgctcacgctcggctag
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