KEGG   Cupriavidus metallidurans: Rmet_1199
Entry
Rmet_1199         CDS       T00351                                 
Symbol
lpdA
Name
(GenBank) Dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rme  Cupriavidus metallidurans
Pathway
rme00010  Glycolysis / Gluconeogenesis
rme00020  Citrate cycle (TCA cycle)
rme00260  Glycine, serine and threonine metabolism
rme00280  Valine, leucine and isoleucine degradation
rme00310  Lysine degradation
rme00380  Tryptophan metabolism
rme00620  Pyruvate metabolism
rme00630  Glyoxylate and dicarboxylate metabolism
rme00640  Propanoate metabolism
rme00670  One carbon pool by folate
rme00785  Lipoic acid metabolism
rme01100  Metabolic pathways
rme01110  Biosynthesis of secondary metabolites
rme01120  Microbial metabolism in diverse environments
rme01200  Carbon metabolism
rme01210  2-Oxocarboxylic acid metabolism
rme01240  Biosynthesis of cofactors
Module
rme_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rme_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rme_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rme_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rme_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rme00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Rmet_1199 (lpdA)
   00020 Citrate cycle (TCA cycle)
    Rmet_1199 (lpdA)
   00620 Pyruvate metabolism
    Rmet_1199 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    Rmet_1199 (lpdA)
   00640 Propanoate metabolism
    Rmet_1199 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Rmet_1199 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    Rmet_1199 (lpdA)
   00310 Lysine degradation
    Rmet_1199 (lpdA)
   00380 Tryptophan metabolism
    Rmet_1199 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Rmet_1199 (lpdA)
   00670 One carbon pool by folate
    Rmet_1199 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rme04147]
    Rmet_1199 (lpdA)
Enzymes [BR:rme01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Rmet_1199 (lpdA)
Exosome [BR:rme04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Rmet_1199 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Biotin_lipoyl_2 Pyr_redox_3 AlaDh_PNT_C GCV_H NAD_binding_8 DEC-1_N RnfC_N FAD_binding_2
Other DBs
NCBI-ProteinID: ABF08085
UniProt: Q1LP41
LinkDB
Position
1317732..1319510
AA seq 592 aa
MSVIEVKVPDIGDFDAVEVIEVLVKAGDTVEEEQSLIVLESDKASMEVPSSAAGKVVDVK
VKVGDKVAKGTLICTVEGGAAAAPAPAPAAAPKPAAAPAPAPAAAPAAATHAGGADIQCE
MLVLGAGPGGYSAAFRSADLGMNTVLVERYGTLGGVCLNVGCIPSKALLHNAAVIDEAKA
LAAHGILFGEAKIDLDGLRHYKESVVGKLTGGLSGMAKARKVQVVRGIGTFLDPHHLEVQ
ETEGDSKATNGKKTVIRFEKAIIAAGSQAVKLPFVPEDPRIFDSTGALELRDIPNKMLVI
GGGIIGLEMATVYSTLGARLDVVEMLDGLMQGADRDLVKVWDKVNKHRFDNVMLKTKTVG
VEAKPDGIYVKFEGESAPAEPQRYDAVLVSVGRSPNGKKIGAEKAGVAVTDRGFIDVDKQ
MRTNVPHIYAIGDIVGQPMLAHKAVHEAHVAAEAAHGEKAYFDAKQIPSVAFTDPEVAWA
GKTEDQCKAEGIKYSKGVFPWAASGRAIANGRDEGFTKLIFDEETHRIIGGGIVGTHAGD
LISEVCLAIEMGADAVDIGKTIHPHPTLGESIGMAAEIYEGVCTDVPPPRKR
NT seq 1779 nt   +upstreamnt  +downstreamnt
atgagtgtgatcgaagtcaaggtgccggatatcggcgatttcgacgcggtggaagtgatc
gaggtgctggtcaaggctggcgacacggtcgaggaagaacagtcgctgatcgtgctggag
tccgacaaggccagcatggaagtgccgtcgtcggccgccggcaaggtcgtggacgtcaag
gtcaaggtgggcgacaaggtcgcgaagggcacgctgatctgcaccgtcgaaggtggcgcg
gcggcggctcctgccccggcgccggcggcggcgcccaagcccgcggctgcgcctgctccg
gcgccggcagcggctccggcggccgccacgcatgccggtggcgccgacatccagtgcgaa
atgctggtgctgggcgcaggccccgggggttactcggcggctttccgctcggcggacctc
ggcatgaacaccgttctggtcgagcgctatggcaccctgggcggcgtttgcctgaacgtg
ggctgcatcccgtcgaaggcgctgctgcacaacgcggcggtgatcgacgaggccaaggca
ctggccgcgcacggcatcctgttcggcgaagccaagatcgatctggatggcctgcggcac
tacaaggaaagcgtggtcggcaagctgaccggcggtctgtcgggaatggcgaaggcccgc
aaggtgcaggtggtgcgcggcatcggcacgttcctggatccgcatcatctggaagtgcag
gaaacggaaggcgacagcaaggccaccaatggcaagaagaccgtgatccgcttcgaaaag
gcgatcatcgcggctggcagccaggccgtgaagctgccgttcgtccctgaggatccgcgc
attttcgattcgacgggcgcgctggaactgcgcgacatcccgaacaagatgctcgtgatt
ggcggcggcatcatcggcctggaaatggccactgtctacagcacgctcggcgcgcgactc
gatgtcgtggaaatgctcgacggcctgatgcagggcgctgaccgcgatctggtcaaggtc
tgggacaaggtgaacaagcatcgcttcgataacgtgatgctgaagaccaagactgtcggc
gtggaagcgaagccggatggcatctacgtgaagttcgagggcgagtccgcgccggccgag
ccgcagcgttacgacgccgtgctggtgtcggtgggccgttccccgaacggcaagaagatc
ggtgccgagaaggccggtgtagcagtgaccgaccgtggcttcatcgatgtcgacaagcag
atgcgcaccaatgtgccgcacatctacgcgatcggcgatatcgtcggccagccgatgctt
gcacacaaggcggtgcatgaggcacatgtggccgccgaagccgcgcatggcgagaaggcc
tacttcgacgcgaagcagatcccgtccgtggcgttcaccgatccggaagtggcatgggcc
ggcaagaccgaagaccagtgcaaggccgaaggcatcaagtacagcaagggtgtgttcccg
tgggccgcttcgggccgcgcgatcgccaatgggcgtgacgaaggcttcaccaagctgatt
ttcgacgaggaaacccatcgcatcatcggtggcggtatcgtcggcacccacgcgggcgac
ctgatcagcgaagtctgcctggccatcgagatgggcgcggatgccgtggatattggcaag
acgattcacccgcacccgaccttgggcgagtcgattggcatggctgcggaaatctacgaa
ggtgtgtgcaccgacgtgccgccgccgcgcaagcgctga

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