KEGG   Cupriavidus metallidurans: Rmet_1235
Entry
Rmet_1235         CDS       T00351                                 
Symbol
yoaA
Name
(GenBank) putative ATP-dependent helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
rme  Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:rme00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rme03400]
    Rmet_1235 (yoaA)
Enzymes [BR:rme01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Rmet_1235 (yoaA)
DNA repair and recombination proteins [BR:rme03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Rmet_1235 (yoaA)
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Helicase_C DUF7547 AAA_19 PhoH
Other DBs
NCBI-ProteinID: ABF08121
UniProt: Q1LP05
LinkDB
Position
1356779..1359010
AA seq 743 aa
MRDQSRHASGSSNLSEPIEDTSLSDGPNVAGAADMPESLANAVAAAAADQAALRSSQLAT
IFAETGTLASAIPGYRPRAAQEKMSEAVANAIADNDTVIVEAGTGTGKTYAYLVPAMLWG
GKVILSTGTKNLQDQLYLRDIPTVRHALNVPISVSLLKGRANYVCHYHLERAQANGRLAS
KQDAAWLREISRFAKTTTSGDKAELAEVPENAPVWQLVTSTRDNCLGSECPNYKECFVMR
ARKEAQQADLVVVNHHLFFADVVLRDTGMAELLPAANTVIFDEAHQLPETATLFFGETLS
TSQLLELARDTVAEGLSHARDAVDWVALGAPLERAARDLRLAFGRENARLALGQIDADPR
IREPFHETLDALDTALSDFVEALESQAERAEELEQCHRRALELAQRLAAWRDDRIAASPV
PAAEPADDAEGDQTSQSVQPAQLGPETVRWVEVFSHTVQLHRTPLSIAPIFSRQRAGQPR
AWVFTSATLSVKGNFTHYAAQLGLDRDRSLTLPSPFDYAKQGLLYVPRDMPPPQSPQFTE
AVVERALPLIEAAGGRTFLLCTTLRAVQKASDMLYDLFAERGINLPLLVQGQASRTELLD
RFRELGNAVLVGSQSFWEGVDVRGEALSLVIIDKLPFAPPDDPVLAARMEVLQKKGLSPF
AVHQLPHAVITLKQGAGRLIRSETDRGVLAICDTRLVEKPYGRQIWQSLPPFTRTREADT
VIRFLEGLGRGEAPASESDTDSE
NT seq 2232 nt   +upstreamnt  +downstreamnt
gtgcgcgaccaatcgcgccacgcctcaggaagttccaacttgtccgaaccgatcgaagac
acatccttatccgacggccccaatgtggccggagccgccgacatgccggagtcgctcgcg
aacgccgttgccgcggcggcagccgaccaggccgcgctaaggtcttcgcaactcgctacg
atctttgccgaaaccggcacgctggccagtgcgatccccggctaccggccgcgcgcggcg
caggagaagatgtccgaggccgtggccaatgcgatcgccgacaacgacacggtgatcgtc
gaggctggcacgggtacgggcaagacgtacgcctatctggtgccggccatgctctggggc
gggaaggtcatcctttcgaccggtaccaagaacctgcaggaccagctttacctccgcgac
attccgacggtacgccatgcgctgaacgtgccgatctccgtctccctgctcaaggggcgg
gccaactacgtttgccactatcacctggagcgggcacaggccaacggccggctggcgtcg
aagcaggatgcggcctggttgcgcgagatcagccgattcgccaagaccacgacgtccggg
gacaaggccgagctggccgaagtacccgagaacgcgccagtgtggcagctcgtgacgtcc
acacgggacaactgcctgggcagcgaatgtccgaactacaaggaatgcttcgtgatgcgc
gcccgcaaggaggcgcagcaggccgaccttgtggtcgtcaaccatcacttgttctttgcc
gacgttgtgctgcgcgataccggcatggccgaattgctgcccgccgccaacacagtgatc
ttcgacgaagcgcaccagttgcccgagacggcgacgttgttcttcggcgaaacgttgtcg
acgagccaactgctcgagctggcccgtgataccgtggccgaagggctgtcgcacgcgcgc
gatgcggtggactgggtcgcgcttggggcaccgctcgaacgggctgcccgcgatctgcgc
ctggctttcggcagggagaacgcccgccttgcgctggggcagatcgacgccgacccgcgc
attcgcgagccgtttcacgaaacgctcgacgcgctcgacacggcgctgtccgactttgtc
gaggcactggaatcgcaggccgagcgtgccgaggagcttgaacagtgccatcgccgcgcg
ctcgaactcgcccagcggctggcggcatggcgcgacgaccggattgccgcatccccggtg
cctgcggccgagccggccgacgatgcggaaggcgaccagacttcccagtctgtccaacct
gcccagcttggccccgaaaccgtacgctgggtggaagtgttctcgcacacggtgcagttg
catcggacgccgttgtcgatcgcgccaatcttcagccggcaacgcgcaggccaaccacgc
gcgtgggtcttcacctctgccacgctgtccgtgaagggcaacttcacccattacgccgcg
cagcttgggctggatcgcgatcggtcgttgacactgccgagcccgtttgactatgcgaaa
caggggctgctgtatgtgccccgggatatgccaccgccgcaatcgcctcaatttaccgag
gcggtggtggagcgggcgctgccgttgatcgaggcggcaggtggtcgcacgttcctgctt
tgcaccacgttgcgggcggtgcagaaggcgtcggacatgctctatgacctgttcgctgag
cgtggtatcaacctgccgctgctcgtgcagggccaggcgagccgtaccgaattgctcgac
cgcttccgcgagcttggcaatgccgtgctggtgggcagccagagtttctgggaaggcgtt
gatgtccgtggcgaggcgctgtcgctggtcatcatcgacaagctgccgttcgcaccgccc
gatgatccagtgctggcagcgcgcatggaagtactgcagaagaaggggctcagcccgttc
gcggttcaccagcttccgcatgcggtgatcacgctgaagcagggtgctggccgactgatc
cggtctgagaccgatcgcggcgtgctggcgatttgcgatacccggctcgtggaaaagccg
tatggccggcagatctggcagagtcttccgccgttcacgcgcacgcgagaagccgacacc
gtcattcggttcctggaagggttggggcgaggtgaggcaccggcgtccgagtccgacacg
gattcggagtag

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