Cupriavidus metallidurans: Rmet_1936
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Entry
Rmet_1936 CDS
T00351
Symbol
ddpD
Name
(GenBank) D-ala-D-ala transporter subunit; ATP-binding component of ABC superfamily
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
rme
Cupriavidus metallidurans
Pathway
rme02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rmet_1936 (ddpD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rme02000
]
Rmet_1936 (ddpD)
Transporters [BR:
rme02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Rmet_1936 (ddpD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
TniB
AAA_16
AAA_29
ABC_ATPase
SMC_N
FtsK_SpoIIIE
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
ABF08815
UniProt:
Q1LM11
LinkDB
All DBs
Position
2104996..2106009
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AA seq
337 aa
AA seq
DB search
MSTDPLHSHPPAVSVRDLRVSFASGGKTIQAVNGVSLEVAPGEAVALIGESGSGKSVTLR
ALMRLHPPRRTTISGEIQVDGQSVLDLDKRGLARLRGGTVAMVFQEPLLALDPVYTVGQQ
IVECIRTHRGVSTSEARALALKALESVRIPSPERRLAAYPHEMSGGMRQRAMIALALSAQ
PRILLADEPTTALDATVQIQVLILLRELQRELGLSIIFVTHDIGAAVEIADRVAVMYGGR
IVEEGPIRTLMRDARHPYTIALLQSRQHGMGRGERLATIGGAPPDLAALPPGCTFAPRCP
QASAACLSEVPKAVSLGNEHRVSCVRVTAHAASECVA
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgaccccctccattcccatccacccgcagtgtccgtgcgagatctgcgtgtg
tccttcgcaagcggcggcaagacgatccaggccgtcaacggtgtatcgctggaggtagcg
ccgggcgaagccgtggcgctgatcggcgagtcgggctctggcaagagcgtcacgctacgc
gccttgatgcgtttgcacccgccacgccgcacgacgatatccggcgagattcaggtcgac
ggccagtccgtgctggatctcgacaaacgcgggctggcccgcctgcgcggcggcaccgtc
gccatggtgttccaggagccactcctggcgctggaccccgtctacacggttgggcaacag
attgtcgaatgcatccgcacacaccgtggggtatcgacttcggaagcgcgtgcgctggca
ctcaaggcgctggaatccgtgcgcattcccagcccggagcgacgcctggccgcctatccg
catgagatgtcgggcggcatgcgtcagcgcgcgatgatcgcgctggcgctgtccgcgcag
cccaggatcctgctggccgacgagcccacgacggcactcgatgccacggtgcagatccag
gtattgattctgctgcgcgaactgcagcgcgagctcggcctgtcgatcatctttgtcacc
catgatatcggcgccgccgtggaaatcgccgatcgcgtcgccgtgatgtatggcggacgc
attgtcgaggaaggccccatccgcacgctgatgcgtgacgcgcgccatccctacacgatc
gcgttgctgcaaagccgacagcatggcatgggccgtggcgaacgcctcgcgacgatcggt
ggcgcgccgcctgacctcgcagcgctgccgcccggctgcacgttcgcaccacgttgccca
caggccagtgcggcctgcctgtcggaggtcccgaaagccgtatcgctcggcaatgagcat
cgcgtcagctgtgtgcgggttaccgcgcacgctgccagcgaatgcgtcgcctga
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