KEGG   Cupriavidus metallidurans: Rmet_2101
Entry
Rmet_2101         CDS       T00351                                 
Symbol
hfq
Name
(GenBank) host factor I protein (Hfq)
  KO
K03666  host factor-I protein
Organism
rme  Cupriavidus metallidurans
Pathway
rme02024  Quorum sensing
rme03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rme00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rmet_2101 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rmet_2101 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rme03019]
    Rmet_2101 (hfq)
   03036 Chromosome and associated proteins [BR:rme03036]
    Rmet_2101 (hfq)
Messenger RNA biogenesis [BR:rme03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Rmet_2101 (hfq)
Chromosome and associated proteins [BR:rme03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Rmet_2101 (hfq)
SSDB
Motif
Pfam: Hfq LSM Hfq_1 EDC3_N SRP14
Other DBs
NCBI-ProteinID: ABF08980
UniProt: Q1LLJ6
LinkDB
Position
complement(2282348..2282587)
AA seq 79 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFRVDDSSES
NT seq 240 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaattgctacaagacccgtttctgaatgcgctgcgcaaagagcac
gtgccagtttccatctacctcgtcaatggcatcaagctgcaaggcaatatcgagtcgttc
gaccagtacgtcgtcctgctgcgcaacactgtgacgcagatggtttacaagcatgcgatt
tccactgtcgtgccggcgcgcgccgtcaatttccgtgtggatgattcttccgagagctga

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