Cupriavidus metallidurans: Rmet_2112
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Entry
Rmet_2112 CDS
T00351
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rme03009
]
Rmet_2112 (rumA)
Enzymes [BR:
rme01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Rmet_2112 (rumA)
Ribosome biogenesis [BR:
rme03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rmet_2112 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
TRAM
Methyltransf_23
Methyltransf_15
Methyltransf_11
TRM5-TYW2_MTfase
RrnaAD
MTS
UPF0020
Methyltransf_32
Cons_hypoth95
CMAS
Motif
Other DBs
NCBI-ProteinID:
ABF08991
UniProt:
Q1LLI5
LinkDB
All DBs
Position
complement(2293575..2295050)
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AA seq
491 aa
AA seq
DB search
MSGAATGLQSRFCKTIRQVPLVSQAVSSQPNPTSHPEAASAASAASNDPVVKIDSLDMEA
RGVGRLENEDGTPGKVIFVEGALPGETVAYRSYRRKPSYEQAHLVEVKQASVMRVKPGCQ
HFGVCGGCSMQHLDSRAQLAIKQRVLEDNLWHLSKVKPDVVFRPIAGPDWGYRYRARLTV
RHVVKKGGVLVGFHERKSSYVADMTHCEILPPHVSAMLVPLRELVGGLSIHDRMPQIELA
VGAEVTALVLRVLEPLNDADKDLLRAFADQHQVQFWLQPKGPDTVYPFYPAEQELAYTLP
EFGIRMPFKPTDFTQVNHQINRVLIGRALRLLDAKPTDRLLDLFCGIGNFTLPLATQGAS
VMGIEGSEVLTTRALANAEYNGLAAKTSFACRNLFEVTAEDIAALGRFDRWLVDPPREGA
LAVCKALAELSQAGSDVLPKRIVYVSCSPATLARDAGLLVHEAGYRLAGAGVVNMFPHTS
HVESIAVFERD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgccgcgactggactacaatcgcgcttctgcaaaacaatacgacaggtccca
ctggtgtctcaagccgtgtcttcccagcccaatccgacaagccacccggaagcggcatct
gccgcttccgccgcttccaatgatcccgtcgtcaagatcgacagcctcgacatggaggcg
cgtggcgtcggccgtctggagaacgaggacggcacgccaggcaaggtgattttcgtcgag
ggcgcgctgcccggcgagacggttgcgtatcgcagctatcgccgcaagcctagctacgaa
caggcccatctcgtcgaggtgaagcaggcctccgtcatgcgggtgaagccgggttgccag
cattttggcgtgtgcggcggctgctcgatgcagcacctggactcgcgcgcgcaactggca
atcaagcagcgtgtgctcgaagacaatctctggcacctgtcgaaggtgaagcccgacgtc
gtgttccgcccgatcgcgggcccggattggggctatcgctaccgcgcccgtctgacggtg
cggcacgttgtcaagaagggtggagtactggtgggcttccacgagcgcaagagcagctat
gtggcggacatgacgcactgcgagatcctgccgccgcatgtgtcggcaatgctggtgccg
ctgcgcgaattggtgggcggcctgtcgatccatgatcggatgccgcagatcgaactggcc
gttggtgcggaggtgaccgcacttgtgttgcgcgtcctggagccgctcaacgacgccgac
aaggacttgctgcgggccttcgccgatcagcatcaggtgcagttctggctccagccgaag
gggccggacacggtctatccgttttatccggccgagcaggagctggcctatacactgccc
gagttcggcatccggatgccgttcaagccgaccgacttcacgcaggtcaatcaccagatc
aatcgcgtgctgattggtcgcgcgctacgtctgctggatgcgaagccgactgaccgcctg
ctcgacctgttctgcggcatcggcaatttcacgctgccgctggcgacgcagggtgcatct
gtcatggggatcgagggaagcgaggtgctgaccacgcgtgcgctggccaatgccgagtac
aacgggctggcagccaagacgtccttcgcctgccgcaatctgttcgaggtgaccgccgag
gacatcgcagcgctgggccgcttcgaccgctggctggtagacccgccgcgcgagggtgcg
ctggctgtctgcaaggcgcttgctgaactgagtcaggccggtagcgacgtgctgccgaag
cgtatcgtctatgtgtcgtgcagtccggcgacgctggcgcgtgacgcgggcttgctggtg
cacgaggccggctaccgcctggccggcgcgggcgtggtcaatatgttcccgcatacgtcg
cacgtggagtcgatcgcggtgttcgagcgcgactga
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