Cupriavidus metallidurans: Rmet_2629
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Entry
Rmet_2629 CDS
T00351
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme03420
Nucleotide excision repair
rme03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rmet_2629 (uvrD)
03430 Mismatch repair
Rmet_2629 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_2629 (uvrD)
Enzymes [BR:
rme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rmet_2629 (uvrD)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rmet_2629 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
Rmet_2629 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABF09506
UniProt:
Q1LK20
LinkDB
All DBs
Position
complement(2862070..2864433)
Genome browser
AA seq
787 aa
AA seq
DB search
MSSLLANLNAEQLAAVTLPDEPALILAGAGSGKTRVLTTRIAWLIQNGRVSPAGILAVTF
TNKAAKEMQTRLSSMLPINTRGMWIGTFHGLCNRMLRAHFRDAGLPQTFAILDSQDQLSA
IKRLLKGLNVDDEKYPPKNLQYFINNAKEQGLRPADVEANDDFNRRFVDLYAAYDEQCQR
EGVVDFAELLLRCYELLRYNDAIRQHYQHRFRHVLVDEFQDTNVLQYQWLKLLAGYGSGN
AAAVFAVGDDDQSIYAFRGANVGNMRDFEQEFRVRHLIKLEQNYRSHGHILDSANHLISH
NARRLGKNLRTDAGHGEPVRVFQAGSDGQEASWIVEEIRDQIAQGMSRSEIAILYRSNAQ
SRVIEHALFSSGIPYRVYGGLRFFERAEVKHALAYLQLIENPRNDAAFGRVVNFPTRGIG
AKSLEVLQDAARQYNCSLAEAVAYVPGKAGSSLGAFIRLIEQMRAETSRMTLAQTVEYVT
NTSGLMTHYQTEKEGQDRIENLQELVTAAQAFVVEEGYGLEALGRMLPANRDAMPALAQG
EQDQQVLDPEQLPVVMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFNVVFI
TGLEEGLFPHENSAMEADGLEEERRLMYVAITRARARLYLSFAQSRVLHGQMRYHVRSRF
FEELPEASLKWITPQGQAYGAYGSGSGRQSSERESAWGRDWFKRAEDVPYTGVKPTGGMD
TGKNYAEEKRAAATGFRVGQSVFHNKFGEGKIKALEGEGADARANIDFKRHGTKWLALSV
AKLDAID
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtctgctcgccaatctcaacgctgaacaactcgccgccgtcacattacctgac
gagccggccctgatcctggccggtgcgggcagtggcaagacccgtgtgctgaccacgcgg
atcgcgtggctgatccagaacggccgtgtgtccccggccggcatcctggcggtgaccttc
acgaacaaggccgccaaggagatgcagacccggctgtcgtcgatgttgccgatcaacacc
cggggcatgtggatcggcacgttccatggcctctgcaaccggatgctgcgtgcgcatttc
cgtgacgccggcttgccccagacatttgccatcctggactcccaggaccagctttcggcg
atcaagcggctgctcaaggggctgaatgtcgacgacgaaaagtacccacccaagaatctc
cagtacttcatcaacaacgccaaggagcagggcctgcgcccggccgacgtcgaagccaat
gacgatttcaatcgtcgcttcgtcgacctgtacgcggcctacgacgagcagtgccagcgc
gagggcgtggtcgacttcgccgaactgttgctgcgctgctacgaactgctgcgttacaac
gacgcgatccgccagcactaccagcaccgtttccgccatgtgctcgtcgacgagttccag
gacaccaacgtgctgcagtaccagtggctcaagctgcttgccggctacggctcgggcaat
gccgcggcagtgttcgccgtgggcgacgatgaccagagcatctacgcgttccgtggcgcc
aacgtcggcaatatgcgcgacttcgagcaggaattccgcgttcgccacctgatcaagctc
gagcagaactaccgctcgcacgggcatattctcgattcggccaaccacctgatctcgcac
aatgcgcgccgactgggcaagaacctgcgcaccgacgccgggcacggcgagccggtgcgc
gtgttccaggcaggttcggacggccaggaagcctcgtggatcgtcgaggaaatccgcgac
cagatcgcgcagggcatgtcgcgctcggagatcgcgatcctctatcgcagcaatgcgcag
tcgcgggtcatcgaacacgcgctgttctcgtcgggtatcccgtaccgggtgtacggcggc
ctgcgcttcttcgagcgcgccgaagtgaagcacgcgctggcctacctgcagttgatcgag
aaccctcgcaatgacgccgcattcgggcgggtggtcaatttccccacgcgcggcatcggc
gcgaagtcgctcgaagtgctgcaggacgcagcgcggcagtacaactgttcactggccgaa
gccgtggcctacgtgcctggcaaggccggcagctcgttgggcgcctttatccggctgatc
gagcagatgcgtgccgagaccagccggatgacgctggcgcaaacggtcgagtacgtgacc
aacaccagcggcctgatgacgcattaccagaccgagaaggaaggccaggaccgcatcgag
aacttgcaggaactggtgacggccgcgcaggcattcgtggtcgaggaaggctacgggctc
gaggcgctgggccgcatgctgccggcgaaccgcgatgccatgccggcgctggcgcagggc
gaacaggaccagcaggtgctggaccccgaacagttgccggtggtgatgacgccgctggtg
gcgttcctgacccatgcatcactggaggcgggggacaaccaggcgcaggccggccaggat
gcggtgcaaatgatgaccgtgcacgcggccaaggggctcgagttcaatgtggtgtttatc
accgggctcgaggaaggcctgttcccgcacgagaacagcgcgatggaagccgacggtctg
gaggaagaacgccgcctgatgtatgtggccatcacgcgcgcgcgggcacggctctatctg
tcgttcgcccaaagccgcgtgctgcacggccagatgcgctatcacgtgcggtcgcgcttc
ttcgaggagcttcccgaggcttcgctgaagtggatcactccgcagggccaggcctatggt
gcctatggctcaggtagcggacgccagtcatctgagcgcgaaagcgcttggggccgtgac
tggttcaagcgtgccgaggacgtgccctataccggcgtcaagccgaccggcggcatggac
accggcaagaactacgccgaagagaagcgcgccgcggccactggattccgcgtgggccag
agcgtgttccacaacaagttcggggaaggcaagatcaaggcgctggaaggcgagggcgcc
gatgcgcgcgcgaacatcgacttcaagcgtcacggcaccaagtggctggcgctgtcggtg
gcgaagctggacgcgattgattga
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