Cupriavidus metallidurans: Rmet_3094
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Entry
Rmet_3094 CDS
T00351
Symbol
ffh
Name
(GenBank) Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme02024
Quorum sensing
rme03060
Protein export
rme03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Rmet_3094 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Rmet_3094 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rmet_3094 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rme02044
]
Rmet_3094 (ffh)
Enzymes [BR:
rme01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
Rmet_3094 (ffh)
Secretion system [BR:
rme02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Rmet_3094 (ffh)
Eukaryotic Sec-SRP protein
Rmet_3094 (ffh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
Zeta_toxin
AAA_31
nSTAND3
AAA_30
APS_kinase
T2SSE
ArsA_ATPase
AAA_26
AAA_33
Thymidylate_kin
6PF2K
YqeC
AAA_16
AAA_18
AAA_14
KTI12
NAT10_TcmA_helicase
TsaE
Motif
Other DBs
NCBI-ProteinID:
ABF09966
UniProt:
Q1LIR0
LinkDB
All DBs
Position
3352629..3354020
Genome browser
AA seq
463 aa
AA seq
DB search
MLDNLTQRLARVVKTMRGEARLTEANTAEMLREVRLAMLEADVALPVVREFIARVKEKAL
GEDVVTSLTPGQALVGVVQRELTAVIGGDEAVADQKSNELNLNVQPPAVILMAGLQGAGK
TTTSGKLAKWLKENKKKKVLTVSCDVYRPAAIAQLKTVSEQVGVDFFPSQPDQKPVEIAR
AALDWARKHYHDVLIVDTAGRLGIDEAMMQEIAALHAELKPAETLFVVDAMLGQDAVNTA
KAFNDALPLTGVVLTKLDGDARGGAALSVRHITGRPIKFVGVGEKLDGLEPFYADRMAQR
ILGMGDILALVEEAQRGVDMEAAEKLAKKIKKTGGFDLEDFKAQIGQMKKMGGLGSLVDK
LPAQFAAQAQGANMDQAEKQVRRMEGIINSMTPAERAKPDLIKASRKRRIAAGAGVPVQE
VNRLLNQFDQMQGMMKKLKGGGMMKMMRQMGAMKGGMKGLFNR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgctggataacctcactcaacgcctggcgcgggtcgtcaagaccatgcgcggcgaggcc
cgactgaccgaggccaataccgccgagatgctgcgcgaagtgcgccttgccatgctcgaa
gccgacgtggcactgccggtcgtgcgcgaattcattgcccgcgtcaaggaaaaggccctt
ggcgaggacgtcgtcaccagcctgacaccgggccaggccctggtgggcgtggtgcagcgc
gagctgacggcggtcatcggcggcgatgaagccgttgccgaccagaagtccaacgaactg
aacctgaacgtccagccgccggcggtcatcctgatggccggcctgcaaggcgccggcaag
accaccacttcgggcaagctggccaagtggctgaaggaaaacaagaaaaagaaggtcctg
acggtctcttgtgacgtgtaccgccccgccgctatcgcccagctcaagactgtgtccgag
caggttggcgtcgactttttcccgtcccagcccgaccagaagccggtggagatcgcgcgt
gccgcgctcgactgggcgcgcaagcactatcacgatgtgctgatcgtcgatacggctggc
cgactgggtatcgacgaggcgatgatgcaagagatcgccgcgctgcacgccgaactgaag
cccgccgaaaccctgttcgtggtcgatgcgatgctcggccaggatgcggtcaacacggcc
aaggcgttcaatgacgcgctgccgctgacgggcgtggttctgaccaagcttgacggtgac
gcgcgcggtggcgcggcgttgtccgtgcgtcacatcaccgggcgtccgatcaagttcgtc
ggcgtgggcgaaaagctcgatggcctggagccgttctatgccgaccgcatggctcagcgg
attctgggcatgggcgacatcctcgcactggtagaggaagcccagcgcggcgtggacatg
gaagccgccgagaagctggccaagaagatcaagaagaccgggggcttcgacctcgaggac
ttcaaggcgcagatcggccagatgaagaagatgggcggcctgggcagcctggtcgacaag
ctgccggcccagttcgccgcgcaggcgcaaggcgcgaacatggaccaggcagaaaagcag
gtgcgccgcatggagggcatcatcaacagcatgacgccggccgagcgcgccaaacccgat
ctgatcaaggctagccgcaagcgccgcatcgccgctggcgccggcgtgccggtgcaggaa
gtgaaccgcctgctcaatcagttcgaccagatgcagggcatgatgaagaagctcaagggc
ggcggcatgatgaagatgatgcgccagatgggcgcgatgaagggtggcatgaagggcctg
ttcaaccgctga
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