Cupriavidus metallidurans: Rmet_3130
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Entry
Rmet_3130 CDS
T00351
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00470
D-Amino acid metabolism
rme00550
Peptidoglycan biosynthesis
rme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rmet_3130 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rmet_3130 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rme01011
]
Rmet_3130 (murD)
Enzymes [BR:
rme01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Rmet_3130 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rme01011
]
Precursor biosynthesis
Amino acid ligase
Rmet_3130 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
ApeP-like
Motif
Other DBs
NCBI-ProteinID:
ABF10002
UniProt:
Q1LIM4
LinkDB
All DBs
Position
complement(3392911..3394425)
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AA seq
504 aa
AA seq
DB search
MFGVLQKPHVLVLGLGESGLAMARWCGLNGCRVRVADTREAPANLVFLQAELTTAQFMGG
QFTENLLDDIGLVAISPGLSPLEPNTRALLEAAQARSIPVWGEIELFAQAIGYLEATSGY
APRVLAITGTNGKTTTTALTGRLIERAGKTVGVAGNISPSALDKLSACIASATLPDVWVL
ELSSFQLEYTFSLAPHAATVLNVTQDHLDWHGSMEAYAAAKARIFGPAEKGCLQVLNRQD
PLTMNMARRGTTLVTFGTDLPETPGSYGVLREGGMPWLVLAEPDTEADAEQKPRRRKKDD
VAADAVVPVRHKRLMPADALHIRGMHNATNAMAALALCRAIDLPLNALLHGLREYRGEPH
RVEWVATIDEVEYFDDSKGTNVGATVAALSGLDKHVVLIAGGEGKGQDFSPLVAPVAQYA
RAVVLIGKDAGALREALGATGKPLIDAGSLEEAVEKSASLAEAGDVVLLSPACASLDMFR
NYVHRAQVFRGAVEELALSRGIMP
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgtttggcgtgttgcagaaacctcatgtgctggtacttggcctcggtgaatcggggctg
gccatggcacgctggtgcggcctgaatggctgccgcgtgcgcgtggccgacacacgcgag
gcgcccgccaaccttgtcttcctgcaggcggaactgaccacggcccagttcatgggcggg
cagttcaccgagaacctgctcgacgatatcggtctggtggcgatcagccccgggctgtcc
ccgctcgaacccaataccagggcgctgctcgaggcggcgcaggcacgcagtattcctgtc
tggggcgagatcgaactgttcgcccaggcgattggctacctggaggccacgtcgggctac
gccccgcgcgtgctggccatcaccggtaccaacggcaagaccacgaccaccgcgctgact
ggccggctgatcgagcgcgcaggcaagaccgtgggcgtggcaggcaatatcagcccgtct
gcgctggacaagctgtcggcctgcatcgccagcgccacgttgcccgatgtctgggtgctc
gaactgtccagcttccagctcgaatacacgttctcgctggcgccgcacgcggccacggtg
ctcaatgtcacgcaggaccacctcgactggcacggcagcatggaagcgtatgccgccgcc
aaggcgcgcatcttcggcccggccgagaagggctgcctgcaggtgctcaaccggcaggac
ccgctgacgatgaacatggcccgccgcggcaccacgctggtcacgttcggcactgacctg
cccgagacgccgggcagctacggcgtgctgcgcgaaggcgggatgccatggctcgtgctg
gccgagcccgacaccgaagccgatgccgagcagaagccgcgccgccgcaagaaggacgat
gtcgccgccgacgccgtcgtgccggtacgccacaagcgcctgatgccggccgacgcgctg
cacatccgcggcatgcacaacgccaccaacgcgatggccgcgctggcgctgtgccgcgcg
atcgacctgccgctcaacgcgctgctgcacggcctgcgcgagtatcgtggcgagccgcac
cgcgtggaatgggtggcaacgatcgatgaagtcgaatacttcgacgacagcaaggggacg
aacgtcggcgccaccgtggctgcactgagcgggctggataagcacgtggtgctgatcgcc
ggtggcgagggcaagggccaggatttctcgccgctggtcgcgccggtggcgcaatacgcg
cgcgccgtggtgctgatcggcaaggatgcgggcgcgctgcgcgaggcgctgggggctacc
ggcaaaccgctgatcgacgccggctcgctggaagaagcggtagagaaatccgccagcctc
gcggaagcgggcgacgtggtgctgctgtcgccggcttgcgccagcctcgacatgttccgt
aactacgtgcatcgcgcccaggtgttccgcggcgcggtggaagaactggctttgtcccgg
gggatcatgccatga
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