Cupriavidus metallidurans: Rmet_3490
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Entry
Rmet_3490 CDS
T00351
Symbol
priA
Name
(GenBank) Primosome factor n' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rmet_3490 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_3490 (priA)
Enzymes [BR:
rme01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rmet_3490 (priA)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rmet_3490 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_30
ADDB_N
Zn_ribbon_6
AAA_19
GpA_ATPase
SLFN-g3_helicase
HypA
AAA_22
DUF5817
Motif
Other DBs
NCBI-ProteinID:
ABF10362
UniProt:
Q1LHL4
LinkDB
All DBs
Position
complement(3778718..3781012)
Genome browser
AA seq
764 aa
AA seq
DB search
MTSAAAPVDTALQPASAEAAAGLVRVALDTPADDYFDYLADAAVMPGELVVVPFGKRHVM
GVVLDRPDNTEVPADRLRPVTGHLTWMPPLNAAWIGLARFAARYYHRCLGEVMLPALPPS
LRDPQTWERLEQRARTTQYRVRPAQSEALLAAAPSRARTVRALAEALIAAPDGLRLAEAR
ELCTAAPARLAEWEAAGCIQSTHADRPLLDKAPTQVPSVAPTLHDEQRAAVDAITAAEGY
AAFLLHGVTGSGKTEVYLHAIAARLDEDPAAQVLMLVPEINLTPQLQARIAERFPDQPLA
VLHSGLADQERSLQWLAAHRGEARIVLGTRMAVMASVPNLKLIVVDEEHDTSYKQQEGLR
YSARDLAVWRANQLGIPVVLGSATPSMESWYRAEQGAYRKLVLRDRAQADAALPTVRLID
LNHERQRQRTLYEGLSVPLLDAIQQRLDRGQQSLLFLNRRGYAPVLACDSCGWLSGCPRC
SAYLVLHRPERRLRCHHCGLEAPVPHHCPDCGNVDIAPLGRGTQRIEEALAARFPQARIA
RIDADSTRRKGSAQAMLDEVHAGEVDILVGTQMVAKGHDFQRVTLVGIVHPDAAMFSHDF
RAAEHLFASLMQVSGRAGRAGLGGEVLIQTRYPDAPALQALVRHDYDGFAASQLRERRQA
GLPPYAYQVLVTAEHAQLERALAFLQAARACADASPMAAEVQLHDPVPMSMVRLFNKERA
QMLVEAGSRPLLQRFVSEWVRTFDDAATRVKGVRWQLEIDPLRI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggcggcggcgcctgtggatactgcgttacagcccgcatccgctgaggctgcg
gcgggcctcgtgcgcgtcgcattggatacccccgctgacgactacttcgactatctggcg
gatgccgcggtgatgccgggcgagctcgtggtcgtgccatttggcaagcgccatgtcatg
ggggtcgtgctcgatcgacccgacaacaccgaggtacccgcagaccgcctgaggccggtg
acgggccatctgacgtggatgccaccgctcaacgccgcgtggatcggccttgcccgtttt
gccgcgcgctactaccaccgctgtctgggcgaagtgatgctgcccgcgctgccgccgtcg
ctgcgcgatccgcagacgtgggaacggctggaacaacgcgcccgaaccacgcagtaccgg
gtacgcccggcgcagtcagaagccttgctggcggcagcgccgtcgcgcgcacgaaccgtg
cgggcgctggctgaagcgttgattgcggcgcctgatgggttgcgccttgcagaagcccgc
gagctttgcacggcggccccggcacgcctggccgagtgggaggccgctggttgtatccaa
agcacccatgcagaccgtccgctgctcgataaagcccccacgcaggtaccatctgtcgcc
ccgacgctccatgacgagcagcgtgcggccgtggatgccatcaccgccgccgaaggctat
gccgccttcctgctccacggggtgaccggcagcggcaagacggaagtctatctccacgcc
atcgccgcgcgattggacgaggacccagccgcccaggtattgatgctggtccccgagatc
aacctcacgccccaactgcaggcgcgtatcgccgagcgctttcctgaccagccactggcc
gtcctgcatagtggactggccgatcaggagcgcagcctccagtggctggcagcgcatcgc
ggcgaggcgcgtatcgtgctcggcacacgcatggccgtcatggcatccgtgccgaacctg
aaactgatcgtggtcgatgaagagcacgacacctcctacaagcagcaggaaggcctgcgg
tactcggcacgcgatctggccgtgtggcgagccaaccagttaggcatcccggtagtgctt
ggctcggccacaccgtccatggagtcctggtaccgggcggagcagggcgcctatcgcaag
ctggtgctgcgggatcgcgcccaggcggatgccgcactgcccacggtcaggctgatcgac
ctgaaccatgaacgccagcgtcagcgcacgctctatgaagggctgtcggtgccgctgctc
gatgccatccagcagcggctggatcggggtcagcagagcctgttgttcctgaaccggcgg
ggctacgcgccagtcctggcctgcgacagttgcggctggctctcgggctgcccgcgatgc
tcggcgtacctggtgctgcatcgcccggagcggcggttgcgctgccaccattgcgggctt
gaggcgcccgtgccgcatcattgccccgactgcggcaatgtcgacatcgcaccgcttggc
cggggcacgcagcggatcgaggaagcgctggccgcacgttttccacaggcacgcatcgcc
cggatcgacgcggattccacgcggcgcaagggcagtgcgcaggccatgctcgacgaggtc
catgccggcgaggtcgacatcctggtgggcacgcagatggtggccaagggacacgacttc
cagcgtgtcacgctggtgggcatcgtccaccctgatgccgccatgttcagtcacgatttc
cgcgcggccgagcacctgttcgcgtcgctgatgcaggtgtctggccgcgccggcagggca
gggctgggcggcgaagtgttgatccagacccgctatccagatgcccccgcattgcaggct
ttggttcgccatgactatgatggattcgcagccagccagttgcgagagcgccggcaggcc
gggttgcccccatatgcctaccaggtgctggtgacggccgagcacgcgcagctcgagcgc
gcgcttgccttcctgcaggccgctcgcgcgtgcgcggatgccagtccgatggcagccgaa
gtgcaactgcatgacccggtgccgatgtcgatggtgcgcctgttcaacaaagagcgcgcc
cagatgctcgtcgaagccggctcccgtccgttattgcaacggtttgtcagtgagtgggta
cggactttcgatgatgccgcgacacgtgtcaaaggggtgcgttggcaattggaaatcgat
ccgctacgcatttga
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