Cupriavidus metallidurans: Rmet_3538
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Entry
Rmet_3538 CDS
T00351
Symbol
hup
Name
(GenBank) histone-like DNA-binding protein (HU)
KO
K03530
DNA-binding protein HU-beta
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rme03032
]
Rmet_3538 (hup)
03036 Chromosome and associated proteins [BR:
rme03036
]
Rmet_3538 (hup)
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_3538 (hup)
DNA replication proteins [BR:
rme03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rmet_3538 (hup)
Chromosome and associated proteins [BR:
rme03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Rmet_3538 (hup)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Rmet_3538 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
Lmo2446-like_N
RsdA_SigD_bd
Motif
Other DBs
NCBI-ProteinID:
ABF10410
UniProt:
Q1LHG6
LinkDB
All DBs
Position
3836433..3836711
Genome browser
AA seq
92 aa
AA seq
DB search
MTKTELIDAIAAGVDGLTKAKAEQALNVTLGAIMDAVAKGETLSLIGFGTFSKGERGERM
ARNPRTGEEIKVEAAKTVKFKAGQKFKDAVNQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaactgaactgatcgacgcaattgcagcaggcgtggacggtctgaccaaggcg
aaggccgagcaagcccttaacgtgaccctgggcgccatcatggacgccgtggccaagggt
gagaccctgagcctgatcggcttcggcaccttcagcaagggcgaacgtggtgagcgcatg
gcgcgtaacccgcgtaccggtgaagagatcaaggtggaagctgcaaagaccgtgaagttc
aaggccggtcagaagttcaaggacgcagtcaaccagtaa
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