Cupriavidus metallidurans: Rmet_3663
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Entry
Rmet_3663 CDS
T00351
Symbol
sbcD
Name
(GenBank) exonuclease dsDNA SbcCD, ATP-dependent, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rme03400
]
Rmet_3663 (sbcD)
DNA repair and recombination proteins [BR:
rme03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rmet_3663 (sbcD)
Archaeal homologous recombinant proteins
Rmet_3663 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ABF10535
UniProt:
Q1LH41
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All DBs
Position
megaplasmid:198565..199710
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AA seq
381 aa
AA seq
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MRFLHTADWHLGRLFHARSLIEDQSHVLDQFVALVRDLRPDAVLIAGDVYDRAVPPPEAV
ALLDDVLARIVVDAGVPVVMIAGNHDSAQRLGFGARLLAARGLHVAGRTGPETSCVTLHD
AHGEVRIYALPYAEPAAVRDALGTDLPTHEAALNAQLDAVRATHPAGVRSVAVAHAFVVG
GAVSESERPLSVGGSGAVAADVFHGFDFVALGHLHRPQSIGARIHYSGSLLKYSLSETEH
IKTVSLIDVDAEGGVRIEAIPLRPLRELRVLTGTLAGLLEAGATDPHRDDYVHAVLTDAG
ALLDPMARLRQVYPNALAIERAVLARSGQAGEAGRKLRELDTASLFANFFREVADTDLDD
DQRRALDDLLAVMQASERESA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttttctccacaccgccgactggcatcttggtcggctcttccacgcccgtagcctg
atcgaggatcagtctcatgtgctcgaccagttcgtcgcgctggtgcgcgatctgcgcccc
gacgccgtgctgattgccggcgacgtgtacgaccgcgcggtgccgccgccggaggccgtg
gcgctgctcgacgatgtgctggcgcgtatcgtggtggatgcgggcgtacccgtggtgatg
atcgcaggcaatcacgacagcgcccaacgcctcggtttcggcgcgcgcctgctggccgcg
cggggtctgcacgtggcggggcgcaccggtccggaaacgtcctgcgtgacgctgcacgat
gcgcacggcgaggtgcgcatctacgccttgccctatgccgaaccggcggcggtgcgcgac
gcgctcggcaccgacttgccgacgcacgaagccgcattgaacgcccagctcgacgccgtc
cgcgccacgcatcccgcaggcgtccgttctgtggccgtggcccatgctttcgtggtgggc
ggcgcggtcagcgaatcggagcgcccgctgagcgtgggcggtagcggtgccgtggccgcg
gacgtgttccacggcttcgatttcgtggcattgggacatctgcatcgtccgcaatccatc
ggcgctaggattcactattcggggtcgctgctcaagtattcgctgtcggaaaccgaacac
atcaagacggtatcgctgatcgatgttgacgccgagggtggcgtccggatcgaggcgata
ccgctgcgaccgttgcgcgaactgcgcgtgctgaccggcacgctggccggcttgcttgag
gcgggcgccaccgacccgcaccgggacgactacgtccatgcggtgctgaccgacgcgggc
gcgttgctggacccgatggcgcgactgcgccaggtctatccgaacgcactggcgatcgag
cgcgcggtgctggcgcgcagcgggcaggccggggaagcggggcgcaagctgcgggaactg
gatacggccagcctgtttgcgaattttttccgcgaggtggctgacacagacctcgacgat
gatcagcgccgcgcgctcgacgatctattggcagtcatgcaggcatcggaaagggagtcg
gcatga
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