Cupriavidus metallidurans: Rmet_3815
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Entry
Rmet_3815 CDS
T00351
Name
(GenBank) conserved hypothetical protein (peptidoglycan-binding domain)
KO
K21470
L,D-transpeptidase YcbB
Organism
rme
Cupriavidus metallidurans
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rme01002
]
Rmet_3815
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rme01011
]
Rmet_3815
Peptidases and inhibitors [BR:
rme01002
]
Cysteine peptidases
Family C82
Rmet_3815
Peptidoglycan biosynthesis and degradation proteins [BR:
rme01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Rmet_3815
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ABF10685
UniProt:
Q1LGP1
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All DBs
Position
megaplasmid:complement(355801..357423)
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AA seq
540 aa
AA seq
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MPMTATAVISTRPSTPHPRRKRTWMRAALCAWFIGAATSAWAQPLWFANGRPTQAAQQAV
AALADAGADGLEPRDYDADGLKRAIAQADSGTALAPESLDRVDNALTVAMRQYLSDLHKG
RIDPRQIHVNFSVADETPFDPDSYLHAAVAANRLPAAIHEAAPSFPLYPTLRDALSRYRA
LATQPLWNTPLPTPPGNKLAIGQPYDGLAQMAQRLEALGDLPQGTPVPKKYEGALVTAVE
SFQKRHGLDADGVIGQGTLAQLNTTPSERVKQIALTMERLRWTPLTAGPRVIVVNIPEFM
LRAYDYVDGKLDIKLEMKVIVGKALNTRTPMFREDMRYIEFSPYWNVPPSIARSEVVPKS
RRDPGYFTRQGFEFVSGGQAITTLSSANLDAVLNGQMRIRQRPGPLNALGDIKFVFPNNQ
NIYLHHTPTPQLFQRGRRDFSHGCIRVEEPVQLAKFVLQDMPEWTEERIRQAMSKGKSNT
IALKQPLPVVLAYGTAIARADGRVYFLPDIYGQDKLLEQALRQRNPPATARAGKLAQTTP
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgaccgccaccgctgttatctcgacccgtccctcgacaccccacccacgccgg
aaacggacatggatgcgagccgcgttatgcgcctggttcatcggcgccgcgacgtccgcc
tgggcgcagccactgtggtttgccaatggacgcccgacgcaagccgcgcagcaggccgtg
gccgcgctggcggatgcgggcgcggatgggctggaaccccgagattacgacgcggacggc
ctcaagcgggccatcgcgcaggccgactccggcacggccctggctccggagtcgttggat
cgggtggacaatgcgctgactgtggcgatgcgccagtacctgtcggacctgcacaagggg
cggatcgacccgcgccagatccacgtgaacttctcggtagcggacgaaacaccgttcgac
cccgacagctatctgcacgccgccgtcgccgcgaaccggctgcccgcggcgattcacgag
gcggcgccatcgttcccgctgtatccgacgctgcgcgacgcgctgagccgctatcgggcc
ctggccacccagccgctctggaacaccccgctgccgacgccaccgggcaacaagctggcc
atcgggcagccctatgacgggcttgcgcaaatggcgcagcgcctggaggcattgggcgat
ctgccccaaggcacgccggttccgaaaaagtacgaaggcgcgctggtgaccgcggtcgag
tcattccagaagcggcatggtctagatgccgacggcgtcatcggacaaggcacgctggcg
caactcaacacaacaccgtccgaacgcgtgaagcagatcgcgctgacgatggagcgcctg
cgctggacaccgttgacggcaggcccccgcgtcatcgtcgtcaacattcccgagttcatg
ctgcgcgcctatgattacgtcgacggaaagctggacatcaagctggagatgaaggtcatc
gtcggcaaggcgctcaacacccgcacgccgatgttccgcgaggacatgcgctatatcgag
ttcagcccgtactggaacgtgccgccatccatcgcgcgcagcgaagtggtcccgaaatcg
cgacgcgatcccgggtatttcacgcgacagggcttcgagttcgtctcgggtggccaggcg
attaccacgctgtcgtcggccaatctcgatgcggtgctgaacggccagatgcgcatccgg
caacggcccggcccgttgaacgcgctgggggacatcaagttcgtcttcccgaacaatcag
aacatctatctgcaccacacaccgaccccgcaattgttccagcgcggccgccgcgatttc
agccacggctgcatccgcgtggaggagccggtgcagttggcgaagttcgtgctgcaggac
atgcccgagtggaccgaggagcggatccggcaggcgatgagcaagggaaagtccaacaca
attgcgttgaagcagcctttgcctgttgtattggcgtacggcaccgccattgccagggcc
gatggacgggtatattttctgcctgatatctacggacaggacaagctgctggagcaggcg
ctgcggcagcgcaacccgccggccaccgcacgcgccggcaagctcgcgcagaccacacca
tga
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