Cupriavidus metallidurans: Rmet_4216
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Entry
Rmet_4216 CDS
T00351
Symbol
lpdA2
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00010
Glycolysis / Gluconeogenesis
rme00020
Citrate cycle (TCA cycle)
rme00260
Glycine, serine and threonine metabolism
rme00280
Valine, leucine and isoleucine degradation
rme00310
Lysine degradation
rme00380
Tryptophan metabolism
rme00620
Pyruvate metabolism
rme00630
Glyoxylate and dicarboxylate metabolism
rme00640
Propanoate metabolism
rme00670
One carbon pool by folate
rme00785
Lipoic acid metabolism
rme01100
Metabolic pathways
rme01110
Biosynthesis of secondary metabolites
rme01120
Microbial metabolism in diverse environments
rme01200
Carbon metabolism
rme01210
2-Oxocarboxylic acid metabolism
rme01240
Biosynthesis of cofactors
Module
rme_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rme_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rme_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rme_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rme_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Rmet_4216 (lpdA2)
00020 Citrate cycle (TCA cycle)
Rmet_4216 (lpdA2)
00620 Pyruvate metabolism
Rmet_4216 (lpdA2)
00630 Glyoxylate and dicarboxylate metabolism
Rmet_4216 (lpdA2)
00640 Propanoate metabolism
Rmet_4216 (lpdA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rmet_4216 (lpdA2)
00280 Valine, leucine and isoleucine degradation
Rmet_4216 (lpdA2)
00310 Lysine degradation
Rmet_4216 (lpdA2)
00380 Tryptophan metabolism
Rmet_4216 (lpdA2)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Rmet_4216 (lpdA2)
00670 One carbon pool by folate
Rmet_4216 (lpdA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rme04147
]
Rmet_4216 (lpdA2)
Enzymes [BR:
rme01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
Rmet_4216 (lpdA2)
Exosome [BR:
rme04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
Rmet_4216 (lpdA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Biotin_lipoyl
Pyr_redox
FAD_binding_2
Pyr_redox_3
HI0933_like
FAD_oxidored
FAD_binding_3
NAD_binding_8
Biotin_lipoyl_2
GIDA
AlaDh_PNT_C
3HCDH_N
Lys_Orn_oxgnase
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
ABF11083
UniProt:
Q1LFJ3
LinkDB
All DBs
Position
megaplasmid:complement(799845..801641)
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AA seq
598 aa
AA seq
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MAAIEVKVPQLSESVSEATLMQWKKQAGEAVKRDEILVELETDKVTLEVPSPADGVLAKI
VQPDGATVHTDDVIAVVDTEGKAVAAASPVAAAAPASAPAPAPAPAPVAAVASGGAGAPA
SAKADFDVIVIGSGPGGYIAAIRAAQLGKTVACIEEWKDDAGKPRLGGTCLNVGCIPSKA
LLASSEYFEQAKHGLAEHGVQVKGVTLDLAQMIQRKAAIVDKFTGGVEFLFRKNKVTWIK
GHGKFKGRAADGVITVEASNGGETTSHTARNVIIATGSKARHLSGVPVDNKIVSDNEGAL
SFDSVPKKLAVIGAGVIGLELGSVWRRLGSEVTLLEALPTFLGALDEAVAREAAKQFGKQ
GLTIHLGVDIGNIEATAKGVSIAYKDKDGAEQKLVADRLIVSIGRVPNTDNLGLDAVGLA
ADARGFIPVDDQCRTPVAGIYAIGDVVRGPMLAHKAEDEGVMAAEVIDGQKPHIDYNCIP
WVIYTEPEIAWVGKSEAQLKAEGREFRSGQFPMMANGRALGIGHPDGFIKMIADAKTDEI
LGVHIISANASDLIAEAVVAMEFKAASEDIGMICHPHPSLSEVMREAALAVRKRALNM
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgatcgaagtgaaggtgccgcagttgtccgaatctgtctcggaagccacgctg
atgcagtggaagaagcaagccggcgaggccgtcaaacgcgacgagatcctggtggaactg
gaaaccgacaaggtcacgctggaggtgccgagtccggccgacggcgtactggcaaagatc
gtccagcccgatggcgccacggtccatacggacgacgtgatcgcggtggtcgacaccgag
gggaaagcggtcgcagcagcctcacccgtggccgctgcagcgccggcatccgccccagcg
cccgcaccggcccctgccccggtagccgccgtggcatcaggtggcgctggtgccccggca
tcggccaaggccgacttcgacgtgatcgtgatcggctccggcccgggtggatatatcgcc
gccatccgtgcggcccagctaggcaagacggtagcctgcatcgaggaatggaaagacgac
gctggcaagccacggctcggcggtacctgcctgaacgtcggctgcattccaagcaaggcg
ctgctcgcctcgtccgagtacttcgagcaagcgaagcatgggctggccgaacatggtgtg
caggtcaagggcgtcacacttgatctggcgcagatgatccagcgcaaggctgcaatcgtc
gacaagttcaccggtggcgtggagttcctgtttcgcaagaacaaggtcacctggatcaag
ggccatggcaagttcaaggggcgggccgcggatggcgtgattaccgtggaggccagcaac
ggcggcgagacgacgtcgcatacggcacgcaacgtcatcatcgcaacgggttcgaaggcc
cgccatctttcgggcgtgccggtcgacaacaaaatcgtctccgacaacgagggcgcgctg
tccttcgattcggtgccgaaaaaactcgcagtgatcggcgccggggtgatcggtctcgaa
ctcggctcggtatggcgacggctcgggtccgaagtcacgctgctggaagccctgcccaca
ttcctcggcgcgcttgacgaagccgtggccagggaagccgccaaacagttcggcaagcag
gggctcacgattcaccttggtgtcgacatcggcaatatcgaagccaccgccaagggcgtc
agcatcgcctacaaggacaaggacggcgccgaacagaagctcgtcgcggaccggttgatc
gtgtcgatcgggcgcgtgccgaacaccgacaatctgggtctggatgccgtgggcctggcc
gccgacgcgcgtggcttcatccccgtggacgaccagtgccgcaccccggtggcgggcatc
tacgctatcggcgatgtcgtgcgcggcccgatgctcgcccacaaggccgaggacgaaggc
gtcatggccgccgaggtcatcgacggccagaagccacacatcgactacaactgcattccg
tgggtgatctacaccgagcccgaaatcgcctgggtgggcaagtcagaagcccagttgaag
gcggaaggccgcgagttccgttccggccagttcccaatgatggcaaacggccgcgcgctt
gggatcggacatccggatggcttcatcaagatgatcgcggacgcaaagaccgacgaaatc
ctgggcgtgcacatcatctccgccaatgcctcggatctgatcgccgaggccgtggtcgcc
atggagttcaaggcggcatcggaggacatcggcatgatctgccacccgcacccatcactg
tccgaggtcatgcgcgaggctgcgctggcggtgcgaaagcgggcgctcaatatgtag
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