KEGG   Cupriavidus metallidurans: Rmet_4216
Entry
Rmet_4216         CDS       T00351                                 
Symbol
lpdA2
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rme  Cupriavidus metallidurans
Pathway
rme00010  Glycolysis / Gluconeogenesis
rme00020  Citrate cycle (TCA cycle)
rme00260  Glycine, serine and threonine metabolism
rme00280  Valine, leucine and isoleucine degradation
rme00310  Lysine degradation
rme00380  Tryptophan metabolism
rme00620  Pyruvate metabolism
rme00630  Glyoxylate and dicarboxylate metabolism
rme00640  Propanoate metabolism
rme00670  One carbon pool by folate
rme00785  Lipoic acid metabolism
rme01100  Metabolic pathways
rme01110  Biosynthesis of secondary metabolites
rme01120  Microbial metabolism in diverse environments
rme01200  Carbon metabolism
rme01210  2-Oxocarboxylic acid metabolism
rme01240  Biosynthesis of cofactors
Module
rme_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rme_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rme_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
rme_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rme_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rme00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Rmet_4216 (lpdA2)
   00020 Citrate cycle (TCA cycle)
    Rmet_4216 (lpdA2)
   00620 Pyruvate metabolism
    Rmet_4216 (lpdA2)
   00630 Glyoxylate and dicarboxylate metabolism
    Rmet_4216 (lpdA2)
   00640 Propanoate metabolism
    Rmet_4216 (lpdA2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Rmet_4216 (lpdA2)
   00280 Valine, leucine and isoleucine degradation
    Rmet_4216 (lpdA2)
   00310 Lysine degradation
    Rmet_4216 (lpdA2)
   00380 Tryptophan metabolism
    Rmet_4216 (lpdA2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Rmet_4216 (lpdA2)
   00670 One carbon pool by folate
    Rmet_4216 (lpdA2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rme04147]
    Rmet_4216 (lpdA2)
Enzymes [BR:rme01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Rmet_4216 (lpdA2)
Exosome [BR:rme04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Rmet_4216 (lpdA2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_binding_2 Pyr_redox_3 HI0933_like FAD_oxidored FAD_binding_3 NAD_binding_8 Biotin_lipoyl_2 GIDA AlaDh_PNT_C 3HCDH_N Lys_Orn_oxgnase HTH_Tnp_1
Other DBs
NCBI-ProteinID: ABF11083
UniProt: Q1LFJ3
LinkDB
Position
megaplasmid:complement(799845..801641)
AA seq 598 aa
MAAIEVKVPQLSESVSEATLMQWKKQAGEAVKRDEILVELETDKVTLEVPSPADGVLAKI
VQPDGATVHTDDVIAVVDTEGKAVAAASPVAAAAPASAPAPAPAPAPVAAVASGGAGAPA
SAKADFDVIVIGSGPGGYIAAIRAAQLGKTVACIEEWKDDAGKPRLGGTCLNVGCIPSKA
LLASSEYFEQAKHGLAEHGVQVKGVTLDLAQMIQRKAAIVDKFTGGVEFLFRKNKVTWIK
GHGKFKGRAADGVITVEASNGGETTSHTARNVIIATGSKARHLSGVPVDNKIVSDNEGAL
SFDSVPKKLAVIGAGVIGLELGSVWRRLGSEVTLLEALPTFLGALDEAVAREAAKQFGKQ
GLTIHLGVDIGNIEATAKGVSIAYKDKDGAEQKLVADRLIVSIGRVPNTDNLGLDAVGLA
ADARGFIPVDDQCRTPVAGIYAIGDVVRGPMLAHKAEDEGVMAAEVIDGQKPHIDYNCIP
WVIYTEPEIAWVGKSEAQLKAEGREFRSGQFPMMANGRALGIGHPDGFIKMIADAKTDEI
LGVHIISANASDLIAEAVVAMEFKAASEDIGMICHPHPSLSEVMREAALAVRKRALNM
NT seq 1797 nt   +upstreamnt  +downstreamnt
atggccgcgatcgaagtgaaggtgccgcagttgtccgaatctgtctcggaagccacgctg
atgcagtggaagaagcaagccggcgaggccgtcaaacgcgacgagatcctggtggaactg
gaaaccgacaaggtcacgctggaggtgccgagtccggccgacggcgtactggcaaagatc
gtccagcccgatggcgccacggtccatacggacgacgtgatcgcggtggtcgacaccgag
gggaaagcggtcgcagcagcctcacccgtggccgctgcagcgccggcatccgccccagcg
cccgcaccggcccctgccccggtagccgccgtggcatcaggtggcgctggtgccccggca
tcggccaaggccgacttcgacgtgatcgtgatcggctccggcccgggtggatatatcgcc
gccatccgtgcggcccagctaggcaagacggtagcctgcatcgaggaatggaaagacgac
gctggcaagccacggctcggcggtacctgcctgaacgtcggctgcattccaagcaaggcg
ctgctcgcctcgtccgagtacttcgagcaagcgaagcatgggctggccgaacatggtgtg
caggtcaagggcgtcacacttgatctggcgcagatgatccagcgcaaggctgcaatcgtc
gacaagttcaccggtggcgtggagttcctgtttcgcaagaacaaggtcacctggatcaag
ggccatggcaagttcaaggggcgggccgcggatggcgtgattaccgtggaggccagcaac
ggcggcgagacgacgtcgcatacggcacgcaacgtcatcatcgcaacgggttcgaaggcc
cgccatctttcgggcgtgccggtcgacaacaaaatcgtctccgacaacgagggcgcgctg
tccttcgattcggtgccgaaaaaactcgcagtgatcggcgccggggtgatcggtctcgaa
ctcggctcggtatggcgacggctcgggtccgaagtcacgctgctggaagccctgcccaca
ttcctcggcgcgcttgacgaagccgtggccagggaagccgccaaacagttcggcaagcag
gggctcacgattcaccttggtgtcgacatcggcaatatcgaagccaccgccaagggcgtc
agcatcgcctacaaggacaaggacggcgccgaacagaagctcgtcgcggaccggttgatc
gtgtcgatcgggcgcgtgccgaacaccgacaatctgggtctggatgccgtgggcctggcc
gccgacgcgcgtggcttcatccccgtggacgaccagtgccgcaccccggtggcgggcatc
tacgctatcggcgatgtcgtgcgcggcccgatgctcgcccacaaggccgaggacgaaggc
gtcatggccgccgaggtcatcgacggccagaagccacacatcgactacaactgcattccg
tgggtgatctacaccgagcccgaaatcgcctgggtgggcaagtcagaagcccagttgaag
gcggaaggccgcgagttccgttccggccagttcccaatgatggcaaacggccgcgcgctt
gggatcggacatccggatggcttcatcaagatgatcgcggacgcaaagaccgacgaaatc
ctgggcgtgcacatcatctccgccaatgcctcggatctgatcgccgaggccgtggtcgcc
atggagttcaaggcggcatcggaggacatcggcatgatctgccacccgcacccatcactg
tccgaggtcatgcgcgaggctgcgctggcggtgcgaaagcgggcgctcaatatgtag

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