Cupriavidus metallidurans: Rmet_4454
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Entry
Rmet_4454 CDS
T00351
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid-CoA ligase (AMP-dependent synthetase and ligase)
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rme
Cupriavidus metallidurans
Pathway
rme00061
Fatty acid biosynthesis
rme00071
Fatty acid degradation
rme01100
Metabolic pathways
rme01212
Fatty acid metabolism
rme02024
Quorum sensing
rme04146
Peroxisome
Module
rme_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rme00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rmet_4454 (fadD)
00071 Fatty acid degradation
Rmet_4454 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rmet_4454 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rmet_4454 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rme01004
]
Rmet_4454 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rme04147
]
Rmet_4454 (fadD)
Enzymes [BR:
rme01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rmet_4454 (fadD)
Lipid biosynthesis proteins [BR:
rme01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rmet_4454 (fadD)
Exosome [BR:
rme04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rmet_4454 (fadD)
Exosomal proteins of breast cancer cells
Rmet_4454 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ABF11319
UniProt:
Q1LEV7
LinkDB
All DBs
Position
megaplasmid:complement(1049674..1051341)
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AA seq
555 aa
AA seq
DB search
MTPYDRKPWLSSYEPGKPHAITPEFTDALSLFRAAVARAPSLPAILYFDGSLSYAELDTQ
SDALACAWQDRGITRGERVAIYLQNIPQFVIALVATWKLGAIAVPVNPMNRARELRVILA
DSGARLLVCSETLYVDIVRPLLAEEANAENGVLPLVMTTSELEYQRRHDPRLFANTSRQE
TPGAESLSAVIAANAGRHPPPAALGPNDIAMLVYTSGTTGVPKGAMNTHGNVAFNAQVYR
DWITLGEGEPILGVAPLFHITGLIGHIGAAFMCAAPLVLACRFEPGVMLDTLREHRPAFT
IGAITVFIALMNHPNATRDCFASLTKIYSGGAPIPPSVVEAFRERFGHYIHNGYGLTETN
SPTHVVPRGVEAPVDPASGTLAVGVPAYNVESYIGDDEGKPMAVGEVGEIISRGPMIVPG
YWNKPQESAKAIVDGYFRTGDVGFMDERGWFYLVDRKKDMINASGYKVWPREVEDVLYTH
PAVREAAVVGVPDAYRGETVKAVVSLKPGTNVTPEELAEYCKARMAAYKYPRVVMIMDEL
PKTVTGKILRRELRG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgacgccctatgaccgcaagccctggctgtcgagctacgagccgggcaagccccacgcg
atcacgcccgagttcaccgacgcgctgagcctgttccgtgccgcggtagcgcgcgcgccg
tcgctgccagccattctctacttcgacggcagcctgagctacgccgaactcgacacgcaa
tccgacgcgctcgcctgcgcgtggcaagaccgcggcatcacgcgcggagaacgcgtggcc
atttacctgcagaacatcccgcagttcgtcatcgctctggtggcgacgtggaagctgggc
gccattgccgtgcccgtcaacccgatgaaccgcgcgcgcgaactgcgcgtgatcctggcg
gattcgggcgctcgcctgctggtttgctccgagactctgtacgtcgatatcgtccgcccc
ctgcttgccgaagaagccaatgcggaaaacggcgtgctgcctctggtgatgacgacatcc
gaactggagtaccaacggcgccacgacccacggctgttcgccaatacgagccgacaggag
acaccgggcgcggaatccctgtcggcagtgatcgcagccaacgccggccgccatcctccg
ccagcggcgctggggccgaacgacatcgccatgctggtgtacacctccggcaccaccggc
gtgcccaagggcgcgatgaacacccacggcaacgtagccttcaacgcccaggtctaccgc
gactggatcacgctgggcgaaggcgagcccatcctcggcgtcgcgcccctgtttcatatc
accgggctgatcggccatatcggcgccgccttcatgtgcgccgccccgctggtgctggcc
tgtcgcttcgaaccgggcgtgatgctcgacacgctgcgcgaacatcgccccgccttcacc
atcggcgccatcaccgtgttcatcgcgctgatgaaccacccgaacgccacgcgcgattgc
ttcgcgtcgctgaccaagatctactccggcggcgcgccgattccgcccagcgtggtggag
gcctttcgcgagcgcttcggtcactacatccacaacggctacggcctgaccgagaccaac
tcgccaacgcacgtggtgccgcgcggggtcgaggcgcctgtggacccggcctccggcacc
cttgccgtgggcgtgccggcctacaacgtcgagtcctatattggcgacgacgaaggcaag
ccgatggcggttggcgaagtcggcgagatcatttcgcgtgggccgatgatcgtgccggga
tactggaacaagccgcaggagagcgccaaggccatcgtcgatggttacttccgcacgggg
gatgtcgggttcatggacgaacgcggctggttctacctcgtggaccgcaagaaggacatg
atcaacgccagcggctacaaggtctggccacgcgaggtggaggacgtgctgtacacccat
cccgccgtgcgggaggccgccgtggttggcgtacctgatgcctaccgtggcgagacggtg
aaagccgtggtcagcctcaagcccgggacgaacgtcacgccggaagaactggcggagtac
tgcaaggcccggatggcggcgtacaagtatccccgcgtggtgatgatcatggacgagctt
cccaagaccgttaccgggaagatcttgcgacgggagttgcgggggtaa
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